KEGG   Mesorhizobium sp. WSM1497: A9K65_025670
Entry
A9K65_025670      CDS       T04915                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mesw  Mesorhizobium sp. WSM1497
Brite
KEGG Orthology (KO) [BR:mesw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesw03021]
    A9K65_025670
Transcription machinery [BR:mesw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A9K65_025670
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 HTH_30 HTH_28 HTH_23 HTH_Tnp_ISL3 HTH_17 DUF5783 HTH_29 HTH_38 HTH_3 GerE TnsD
Other DBs
NCBI-ProteinID: ARP66359
Position
5221172..5221846
AA seq 224 aa
MPAVLTAVPSAVPGEMQLVHRALARDGDAFHTIIKTHNQRLYRIARGVVRNDSEAEDIVQ
EAYVKAFAHLDAFRGDSSLATWLSRIVINEALGRLRKRRKTVALPENPQAEIIRFPLNPS
DDPERTMAQRQILQLVEQATDSLPDVYRTVFVARVIEGLSIEETADLLGVRPQTVKTRLH
RARALVRKALDDQIGPVLLDAFPFAGRRCERLTSAVMRRLGLES
NT seq 675 nt   +upstreamnt  +downstreamnt
atgcctgctgtgttgacggccgtgccttccgctgtgccaggcgagatgcagcttgtgcac
cgcgcgctggcgcgcgacggcgacgccttccacaccatcatcaagacacacaatcagcgg
ctttaccggatcgcgcgcggcgtcgtgcgcaatgacagcgaggccgaggacatcgtgcag
gaggcctacgtcaaggctttcgcccatctggatgcgtttcgcggcgactcctcgctcgcc
acatggctatcgcgcatcgtcatcaacgaggcgctcggccggctgcgcaaaaggcgcaaa
acggtggcgctgccggaaaatccgcaagccgagatcatccggtttcccctcaatcccagc
gacgatccggaacggacaatggcgcaacggcagatcctccaactggtcgaacaggccacc
gacagccttcccgacgtctaccggacggtgttcgtggcgcgggtgatcgaggggctgagc
atcgaagagaccgccgacctcctcggcgtgcggccgcaaaccgtcaagacaaggctgcac
cgcgcccgcgcccttgtccgcaaggcgctggacgaccagatcgggccggtgctgctcgac
gccttccccttcgccggccggcgttgcgaacgactgaccagcgccgtgatgcgacggctc
gggctggaaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (21)   

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