KEGG   Meleagris gallopavo (turkey): 100541021
Entry
100541021         CDS       T01523                                 
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
mgp  Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mgp04040]
    100541021 (SCN4A)
Ion channels [BR:mgp04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100541021 (SCN4A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel IQ GPHH Protocadherin DUF892
Other DBs
NCBI-GeneID: 100541021
NCBI-ProteinID: XP_031412911
Ensembl: ENSMGAG00000008768
Position
29:complement(1976863..2005717)
AA seq 1705 aa
MFIMITILTNCVFMTMSNPPAWSKNVEYTFTGIYTFESLVKILSRGFCINDFTFLRDPWN
WLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRHKCVRWPPLNDTLVGDFGLGDTTLANATLYGNFTDGI
DGNFTGNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPEGYVCMKTGRNPNYGY
TSYDTFSWAFLSLFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVV
AMAYAEQNDATMLEAQQKEEEFQQLMEQLKKHQEEQEKQLQDKQSSSSSLQSSVAGKKSD
SDLNSDQDKAKDCNGQVVPKVVLQRSATVIEFNPANETEKSGSNHLTVGNQDGPGLEKRV
GSAVSVISNTMEELEEAHQKCPSWWYKFAHMFLVWDCCYPWLKLKEFVKLVVMDPFVDLG
ITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWN
IFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNL
TLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCTLPRWHMHDFFHSFLIVFRILCGEWI
ETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSLAASDDDGEMNNLQ
IAIGRITRGIDFVKSSVLMLLRRLWKGKKVAPEEEQEPSKGDNSVLNHVDSSPDPKPDYM
DGVAGKEYLLMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQSDTEDAKNPLSSDNT
SSLCSTVDYKPPLPEEEEVAEEAEESNEPEECFTEGCVKRFPCLHVDVTSDRGKIWWNIR
KTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIEML
LKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTTTGDLFDIS
VVNNKSDCLALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEE
QPVYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLNMVTMMVETDDQSETK
TDILYKINLVFIVIFTGECVLKMFALRYYFFTIGWNIFDFVVVILSIAGIVLSDIIEKYF
VSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM
SNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPILNSGPPDCDPNLENPG
SSIKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFY
EIWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDLPMVAGDKIHCLDILF
ALTKEVLGDSGEMDALKDTMEEKFMAANPSKVSYEPITTTLKRKHEEVCATKIQRAFRRY
LLRRSVKQASYMYRHSKDVEALLGDAPEKEGLIATKMHEIYGNSGTDAEVGAAIDLAPVP
SSETQSAPVEAKPAGGQRVVKESLV
NT seq 5118 nt   +upstreamnt  +downstreamnt
atgttcatcatgatcaccattttaaccaactgtgtgtttatgacgatgagcaaccccccg
gcgtggtccaagaacgtggaatacaccttcactggaatatacaccttcgagtccctcgtc
aagatactgtcaagaggtttctgcatcaatgactttacattcctgcgcgacccgtggaac
tggctggacttcatggtcatctccatggcctacatcactgagtttgtggacctggggaac
atctctgctctcagaaccttccgtgtcctccgtgccttgaaaaccatcacggtgatccca
gggctgaagacgatcgtgggggcactgatccagtcggtgaagaagctctcggatgtcatg
atcctcactgtcttctgcctgagcgtcttcgccctcatcggcctccagctcttcatgggg
aacctccggcacaagtgtgtgaggtggccgcccctcaatgacactttggtgggggacttt
gggctgggcgacaccacgttggccaacgcaacgctctacggcaacttcactgatggcatt
gatggcaacttcacaggcaacagcaccttcgattttgaagcctacatcaacgatgaagca
aatttctactttctggagggagcgctcgatgccctgctctgtgggaacagcagcgatgct
gggaagtgcccagaggggtatgtgtgcatgaagacgggcaggaaccccaactatggctac
accagctacgacaccttcagctgggctttcctctccctcttccgcctcatgacacaggac
ttctgggagaacctcttccagctgactctgcgtgcagcagggaaaacgtacatgatcttc
ttcgtggtggtgatattcctgggttccttctacctcatcaacctcatcctggctgtggtg
gccatggcctatgcagagcaaaacgatgccacaatgctggaggcgcagcagaaggaagag
gagttccagcagctcatggagcagctgaagaagcaccaggaggagcaggagaagcagttg
caggacaagcagtccagcagcagttccctgcagagcagcgtggctgggaagaagagcgac
tcggatctgaacagcgaccaggacaaggcaaaggactgcaatgggcaggtggtccccaag
gtcgtgctgcagcgctctgccacggtgattgaattcaacccagccaatgagacagagaaa
tcaggctccaaccatctcaccgtgggcaaccaagatgggccagggctcgagaagagggtg
gggagtgccgtcagtgtcatctccaacaccatggaagagctggaggaagctcaccagaag
tgcccgtcctggtggtacaaatttgcccacatgtttctggtgtgggactgctgctatcca
tggctgaagctgaaggaatttgtcaaactggtggtgatggaccccttcgtggacctgggc
atcaccatctgcatcgtgctcaacacactgttcatggccatggagcactaccccatgaca
gaggagtttgagaacgtgctgactgtggggaacctggtcttcacggggatcttcacagca
gagatggtgctgaagctcatcgctctggacccctatgagtacttccagcagggctggaat
atctttgacagcatcatcgtcacgttgagcctggtggagctggggctggccaacgtgcag
gggctctccgtgctgcgctccttccgcttgctgagagtcttcaaattggccaagtcttgg
cccaccctcaacatgctcatcaagatcatcggcaactcagtgggcgccctcgggaatctg
acactggtgctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggg
aagagctacatggagtgcgtctgcaagatctccctcgactgcacactgccccgctggcac
atgcatgacttcttccactccttcctcattgtcttccgcatcctatgcggcgaatggatc
gagaccatgtgggactgcatggaggtggccggtcagaccatgtgcctcatcgtcttcatg
atggtcatggtcatcgggaacctggtggtgctcaacctgttcttggctttgctgctgagc
tccttcagcgccgacagcctggcagcctctgatgatgatggtgagatgaacaacctgcag
atcgccatcggccggatcaccaggggcatcgacttcgtgaagtcttctgtcctcatgctg
ctccgaaggctgtggaagggcaaaaaggtggccccggaggaagagcaggagcccagcaaa
ggggacaactccgtgctgaaccacgtggatagcagcccggatcccaagccagattacatg
gacggagtcgcggggaaggaatatttgttgatggacgagctggaccacatgaatttcatc
aacaatcccaacctgactgtgcaggtccccatcgcctcggaggagtccgacctctacgag
gagacgagcactcagtctgacactgaggatgccaagaaccccctttccagtgacaacacc
tcatccctgtgcagcaccgtggactacaagccaccgctgcctgaggaggaggaggtggcc
gaagaggctgaagagagcaatgagcccgaggagtgcttcactgaaggctgcgtcaagagg
tttccctgtctccacgtggacgtcaccagtgacagagggaagatctggtggaacatcagg
aaaacctgcttcctcatcgtggagcacgactggtttgagaccttcatcgtcttcatgatc
ctcctcagcagcggggcgctggcctttgaggacatctacatagagcagcggaaggtgatc
cgcaccatcctggagtacgctgataaggtcttctcctacatcttcgtcattgagatgctg
ctcaagtgggtggcctatggcttcaaggtctacttcaccaacgcgtggtgctggctggat
ttcctcatcgtcgacgtctccctcatcagcctgacagccaactggctgggatactctgag
ctgggagccatcaaatctctgcggacactgagagcactgagacctctgcgcgccctgtcc
agatttgaaggcatgagggtggtggtaaacgccttgctgggtgccatcccctccatcatg
aacgtcctgctggtctgcctcatcttctggctgatattcagcatcatgggggtgaacctc
tttgcagggaagtactaccggtgcgtcaacaccaccacgggggacctctttgacatcagt
gtggtgaacaataagagcgactgcctggctctcctccacaccaacgaggtcagatgggtc
aacgtcaaagtcaacttcgacaacgtgggcttgggatacctgtccttgctgcaggtggcg
accttcaaaggttggatggacatcatgtacgccgctgtggactcacgtgagattgaagag
cagccagtgtacgagatcaacctctacatgtacatctactttgtcatcttcatcatcttt
ggagccttcttcaccctcaacctcttcatcggcgtcatcattgacaacttcaaccagcag
aagaaaaagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactataat
gccatgaagaagctcggctccaagaaaccccagaagcccatccccaggccctcgaacaag
tttcaagggatggtgtttgactttgttaccaagcaagtgtttgacataaccatcatgatc
ctgatttgtcttaacatggtgaccatgatggtcgaaacagacgatcaaagcgagaccaaa
acagacatcctctacaaaatcaacctggtcttcatcgtcatcttcactggagagtgtgtg
ctaaagatgtttgccttgcgctactacttcttcaccattggctggaacatctttgacttt
gtggtggtcatcctctccatcgcaggcattgtcctctcagacatcatagagaagtacttt
gtgtcacccacgctcttcagggtcatcaggctggcgaggatcggccgcgtcctccggctg
atccgaggagctaaaggcatccggacgctgctcttcgctctcatgatgtccctccctgcc
ctgttcaacatcggcctcctgctcttccttgtcatgttcatctactccatctttgggatg
tccaactttgcctacgtgaagaaggaggcgggaattgatgacatcttcaactttgagact
tttgggaacagcatcatctgcctcttccagatcaccacgtcggccggatgggatgggctg
ctcagcccgatcctaaacagcggtccccccgactgcgaccccaacctggagaatcctggc
agctcaataaagggcaactgcggcaacccatccatcggcatcttcttcttctgcagctac
atcatcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttc
aacgtggccacggaggagagcagcgagcccctctgcgaagacgattttgagatgttctat
gaaatctgggagaaatttgacccggatgccacccagttcattgcgtacagcactttgtct
gattttgtggacaccctacaggagccgctcaaaatccccaagccaaacaagatcaagctg
atcaccatggatttaccaatggttgctggggacaaaatccactgcctggacatcctcttt
gccctgacaaaggaagtgttgggggactccggagagatggacgccttgaaggacaccatg
gaggagaagttcatggctgccaacccctcaaaggtctcctatgaacccatcaccaccact
ctgaagaggaaacacgaagaggtgtgcgcaacgaaaatccagcgggcgttccggaggtac
ctgctgaggcgctcggtcaagcaggcatcctacatgtaccggcacagcaaggatgtggag
gcactgcttggggacgcccctgagaaggaaggtctgattgcaaccaaaatgcacgagata
tatgggaacagtgggaccgatgcagaggtgggtgccgctattgatctcgcacccgtcccg
agctcagagactcaaagtgctcccgtagaagcaaagccagcgggtgggcagcgcgtggtg
aaagagtcgttggtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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