KEGG   Methanothrix harundinacea: Mhar_1445
Entry
Mhar_1445         CDS       T01990                                 
Name
(GenBank) ATP-dependent RNA helicase, putative
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
mhi  Methanothrix harundinacea
Pathway
mhi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mhar_1445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhi03019]
    Mhar_1445
Enzymes [BR:mhi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Mhar_1445
Messenger RNA biogenesis [BR:mhi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Mhar_1445
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 AAA_19 P-loop_SecA AAA_22 UTP25 Flavi_DEAD
Other DBs
NCBI-ProteinID: AET64809
UniProt: G7WKI2
Position
complement(1554203..1555459)
AA seq 418 aa
MLFEDLDIAEPLQRALTKEGYANPTPIQAEAIPHLLRGEDLLGIAQTGTGKTAAFVLPVL
QRISEERRRTVPGAPRALVLAPTRELAAQIDESFGTYGQFLQFSHAAVFGGVSQEPQVKA
LSRGVEALVATPGRLLDLMEQGHIDLKGIEFFVLDEADRMLDMGFAKDVHRIVSALPKKR
HSLFFAATMSREIGELAGRLLKDPVRVEVAPQATPVESIEQRIFFVDQKEKNPLLIGLLQ
QKFLKRVLVFTRTKRRADRVAKVLTRSGIRADAIHGDRTQNQRLAALRGFKAGRLQVLVA
TDIAARGIDVEDISHVINYDLPNEPESYVHRIGRTGRAGRAGTAYSFCSAEERSFLRDIE
RLTRTKIREVEHRYHSEEAKNASGAASEPAPGGSKRPPRRARGAAPSPQRSRRPGPRR
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgctgtttgaagatttggatattgcagagccgctacagcgagctcttacgaaagaaggc
tatgccaatccgacgccgatccaggcggaggcgatcccccatctcctgaggggggaggat
ctcctcggcatagcccagaccgggaccggcaagaccgctgccttcgttttgcccgtcctc
cagaggatctccgaagagaggagaaggaccgtcccgggcgccccccgggccctggtgctg
gcgccgacccgggagctggcggcccagatagacgagtccttcgggacctacggccagttc
ctccagttcagccacgccgccgtattcggaggagtctctcaggagccccaggtgaaggcc
ctttctcgaggcgtcgaggccctcgtcgccacccccggccggctcctggacctgatggag
caggggcacatagacctcaaggggatcgagttcttcgtcctcgacgaggcggacaggatg
ctggacatgggcttcgcaaaagacgtccataggatcgtctcagcccttcccaagaagcgc
cactccctcttcttcgccgccaccatgtcgcgggagatcggcgagctcgccggaaggctc
ctcaaggaccccgtcagggtcgaggtggctccccaggcgacgccggtggagagtatagag
cagaggatattcttcgtcgaccagaaggagaagaacccgctcctcatcggcctcctccag
cagaagttcctgaagagggtcctcgtcttcaccaggacgaagcggcgggccgaccgggtg
gcaaaggtcctcaccagaagcgggatccgggccgacgccatccacggcgacagaacccag
aaccagcggcttgccgccctgaggggcttcaaggccggccggttgcaggtgctggtggcg
accgacatcgccgcccgcggtatcgacgtcgaggatatatcccacgtaataaactacgac
ctccccaacgagcccgagagctacgtccacaggatcggccggacgggcagggcgggtaga
gctggaactgcgtactccttctgctccgccgaggagcggagcttcctccgggatatcgag
aggctcacccggacgaagatccgagaggtggaacatcgataccattccgaggaggcgaag
aacgcctcgggcgcggcgtccgagcccgccccgggggggtcgaagaggcccccgaggagg
gcgaggggagcggccccgtccccgcagaggtcgcgccgtcccgggccgcggcgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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