KEGG   Micromonas commoda: MICPUN_113936
Entry
MICPUN_113936     CDS       T02695                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin ligase Rbx1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mis  Micromonas commoda
Pathway
mis03420  Nucleotide excision repair
mis04120  Ubiquitin mediated proteolysis
mis04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MICPUN_113936 (RBX1)
   04120 Ubiquitin mediated proteolysis
    MICPUN_113936 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    MICPUN_113936 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mis04121]
    MICPUN_113936 (RBX1)
   03400 DNA repair and recombination proteins [BR:mis03400]
    MICPUN_113936 (RBX1)
Enzymes [BR:mis01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     MICPUN_113936 (RBX1)
Ubiquitin system [BR:mis04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   MICPUN_113936 (RBX1)
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     MICPUN_113936 (RBX1)
   Cul2 complex
     MICPUN_113936 (RBX1)
   Cul3 complex
     MICPUN_113936 (RBX1)
   Cul4 complex
     MICPUN_113936 (RBX1)
   Cul7 complex
     MICPUN_113936 (RBX1)
   Cul8 complex
     MICPUN_113936 (RBX1)
   Cul9 complex
     MICPUN_113936 (RBX1)
DNA repair and recombination proteins [BR:mis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      MICPUN_113936 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      MICPUN_113936 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 zf-C3HC4_4 zf-RING-like zf-Nse zf-RING_11 Prok-RING_4 zf-RING_10 zf-RING_6 Rtf2 zinc_ribbon_16
Other DBs
NCBI-GeneID: 8250418
NCBI-ProteinID: XP_002507100
JGI: MicpuN3_113936
UniProt: C1FDA6
Position
1:join(419248..419283,419342..419554,419611..419973)
AA seq 203 aa
MATHKKNFEVKRWNAVAVWSWSICTDTCAICRNSLHEPSIEYQANPSSASEEGLSIAWGN
CGHVFHLDCISKWLRTRSNCPLCNKEWEFAKIEKVRMHDIYLLAEGLACIHRSIIPHMTL
NTDTTPCHGGRWMIIFFNLKPAVFAEESYKTNSSKACPAYFFLERVISCSRRCHPTGRDN
FPRASVECYWHGTKNGKSGFPHD
NT seq 612 nt   +upstreamnt  +downstreamnt
atggcgacacataagaaaaactttgaagtaaaaaggtggaacgcagttgccgtgtggtct
tggtcaatttgcaccgatacttgcgctatttgccgtaacagtttgcatgaaccaagcatc
gaatatcaggcaaatccatcttcagcgtcagaagaaggtctgagcattgcctggggtaac
tgtgggcatgttttccacctcgattgcatatcgaaatggctgcgtacccgaagcaactgt
cctctttgtaacaaagagtgggaatttgcgaagatcgaaaaggtacgaatgcatgacata
tatttgttggcggaaggcctcgcttgtattcaccgatcaattattccgcatatgacccta
aacacggatacaactccctgtcatggggggagatggatgataatttttttcaacctgaaa
ccagcagtgtttgccgaagaatcatataaaaccaactcttcaaaagcttgccctgcgtac
tttttcttggagcgtgtaatttcctgttctcgtcgctgccacccaaccggtcgagataac
ttcccacgagcaagtgtagaatgttattggcacgggacaaaaaatggaaagagtgggttc
ccacatgattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (220)   
   KEGG ORTHOLOGY (1)   
   RefGene (214)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (250)   

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