KEGG   Micromonas commoda: MICPUN_99528
Entry
MICPUN_99528      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K14318  nuclear pore complex protein Nup88
Organism
mis  Micromonas commoda
Pathway
mis03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUN_99528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mis03019]
    MICPUN_99528
Messenger RNA biogenesis [BR:mis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     MICPUN_99528
SSDB
Motif
Pfam: Nup88 Mis12 TMF_TATA_bd HGD-D
Other DBs
NCBI-GeneID: 8241756
NCBI-ProteinID: XP_002500565
JGI: MicpuN3_99528
UniProt: C1E1Y3
Position
3:902831..905368
AA seq 845 aa
MEAFLNPCVRSDGERLDPSLSPAPSLLAEDGRGVLYALGADGVIRACPARLLNAAARGSI
ADDALPTRVFKPEPPIDFEPRTISVSPSGHFAAVGGLRHDASAGSGSIPPSSALAIVSLR
TGGDRSGFEALEDGAPGCRCVPLLDDDFDRHPSMRPLRAAWHPNSDGHLCVLLSDGTLHV
FDAAVGPVAEQAFRLDPWGRGSRPGPYPLRPEIVDFAFAPPHGWGALSLVLLGREGDVYV
MCPFAPWGARYPRVTLESLQPPDENSEVWLATTFPTLRRNGRGADNEDDDDGYDDDAGGG
GGVVPSDDDDDDAGGGGGGAPSDDDDAFAGPTVAARPARIEGVATALRGPLPLGTDPVDG
DGDGGVIGRGAVARSLAAAPFAAGEGGGALLAVAHQRVVADERDERAPNEGRVSATLDVL
ILPQEPSPAWAALSEEDEAAAYEAAACDGGPVLTLAPIAADDDDGSLQPLLAIDRVELAS
GEPTLRRPKTSVAAAQNELAPFVSVVWDPSCRDRVFCCAGGAVHGVTLTWLAAVEGAVDE
EEEGEKSGSELSLPTVVTLMDSPEVLLGVAPCGDPLAEGLLLAVDATGAAYGLRPAPPLP
EGIDAGNEDEAIDSAAASALAGGAEASAELRALAAGPPGPPPAPPAGAAALKPGTIEGNA
ALAAAAIALKERHLRYAHRVHAATKRHSLRLGAEIKRQRVEAKVIREGLEAVLARKEILA
AKIERSVANHEEIRERLRKLAEAERSLPHPLTRAESAFKTTLQANADDLPLLEAKLEELK
RRCEAIGEDFATIGALAAGDGDVFERLAASDPAIAAEIELQDAATKANLERVKEIELAVG
PLDDF
NT seq 2538 nt   +upstreamnt  +downstreamnt
atggaggctttcctgaacccctgcgttcggagcgacggcgaacggctggacccatccctc
tcgccggcgccgagcctgctggcggaggacgggcgaggggttctctacgcgctgggcgcc
gacggcgtgatccgcgcgtgccccgcgcgcctcctcaacgctgccgcgcgcgggtccatc
gccgatgacgcgctccccacgcgcgtcttcaagcccgagcccccgatcgacttcgagcca
cgcacgatctcggtttccccctcggggcacttcgccgcggtgggcggcctgaggcacgac
gcatccgcgggatccgggtccatcccaccgtcctccgcgctcgccatcgtttcgttgagg
acgggcggcgatcggtccgggttcgaagcgttggaagacggcgcgcccgggtgccgatgc
gttccgctgctggacgacgactttgacaggcacccgtctatgcgcccgctccgagccgcg
tggcaccctaacagcgacgggcacctgtgcgtgctcctctccgacggcacgttgcacgtg
ttcgacgccgccgtgggacccgtcgcggagcaggccttcaggctggatccgtggggccgg
ggatcccgaccggggccgtacccgcttcgacccgaaattgtcgattttgcctttgcgccg
ccgcacggttggggcgcgctgtcgctcgtgttgctggggcgggagggggacgtgtacgtg
atgtgcccgttcgcgccgtggggggcgaggtacccgcgggtcaccctggagagcctgcaa
ccgccggatgaaaactcggaggtttggctggcgacgacgttcccgacgcttcgcagaaat
gggaggggggcggacaacgaagacgacgacgacgggtacgacgacgacgcgggcggcggc
ggcggcgtcgtgccgagcgacgacgacgacgacgacgcgggcggcggcggcggcggggcg
ccgagcgacgacgacgacgccttcgcgggacccaccgtcgccgccagacccgctcgaatt
gagggcgtcgcgacggcgctccgggggcccctaccgctcggcaccgacccggtggacggc
gacggcgacggcggcgtgatcggtcgcggcgcggtggcgcgctcgctcgctgcggcgccc
ttcgccgcgggcgagggcggcggcgcgctcctggcggtggcgcatcagagggtggtcgcg
gatgagcgggatgagcgggcgccgaacgaggggcgcgtctccgccacgctggacgtgctc
atcctgccgcaggaaccgtccccggcgtgggccgcgctcagcgaggaggacgaggcggcc
gcgtacgaggcggccgcgtgcgacggcgggcccgtgttgaccctcgcgcccatcgccgcg
gacgacgacgacggatcgctccagccgttgctggccatcgaccgagtcgagctcgcgagc
ggcgagccgacgcttcgaaggccgaagacctccgtcgcggcggcgcagaacgagctcgca
ccgttcgtgtcggtcgtgtgggacccgtcgtgccgcgacagggtgttctgctgcgcgggc
ggtgcggttcacggcgtgaccctcacgtggctcgcagccgtcgagggcgccgtggacgag
gaggaggagggtgaaaaatccggcagcgagctgtcgctgcccaccgtcgtcacgctcatg
gattcgcccgaggtgctcctgggcgtggcgccgtgcggggatccgctcgcggagggtctc
ctcctggcggtggacgcgacgggcgccgcgtacggtttgcgccccgctccgccgcttccc
gagggaatcgacgcggggaacgaagacgaggcgatcgactccgcggcggcgtctgcgctc
gcgggcggcgcggaggcgagcgccgagcttcgagcgctggcggcgggtcctcccggcccg
cctcccgcacccccggcgggcgcggcggcgctcaagccgggcacgattgagggcaacgcg
gcgctcgccgcggcggctatcgcgctcaaggagaggcacttgcggtacgcgcatcgagtc
cacgcggcgaccaaacggcacagcctgcgcctcggcgcggagatcaagcggcagcgagtg
gaggccaaggtcattcgcgagggcctggaggctgtgctcgcgcgtaaggagatcttagcc
gcgaagattgagcgtagcgtcgcgaatcatgaggaaattcgcgagcgactcaggaaactg
gcagaggctgagcgttcgctgccccacccgctcacgcgcgcggagtctgcgttcaagacc
acgctgcaggctaacgcggacgacctaccgctcctggaggcgaagctcgaggagctcaag
aggcggtgcgaggcgattggggaggatttcgcaacaatcggcgcgctggcggctggcgac
ggggacgtgttcgagaggctcgcggcgtcggacccggcgatcgccgcggaaattgagctg
caggacgccgcgacaaaggcgaacctggaaagggtgaaagagatcgagctagcggtcggt
ccactcgatgacttctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (65)   

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