KEGG   Mycobacterium sp. MCS: Mmcs_4485
Entry
Mmcs_4485         CDS       T00367                                 
Name
(GenBank) type III restriction enzyme, res subunit
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mmc  Mycobacterium sp. MCS
Pathway
mmc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Mmcs_4485
  09124 Replication and repair
   03420 Nucleotide excision repair
    Mmcs_4485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmc03021]
    Mmcs_4485
   03400 DNA repair and recombination proteins [BR:mmc03400]
    Mmcs_4485
Enzymes [BR:mmc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mmcs_4485
Transcription machinery [BR:mmc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Mmcs_4485
DNA repair and recombination proteins [BR:mmc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Mmcs_4485
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ABG10589
UniProt: A0A5Q5BQ19
Position
4763030..4764679
AA seq 549 aa
MTDGPLIVQSDKTVLLEVDHEQAQAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHASERGRVKQMLLKIGWPAEDLAGYVDGERHPIDLLQDGW
QLRDYQEMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMLYAVAEPEERYKLCSTVHTKIAVVRSILERHKGEQTLVIGAYLD
QLEELGQELDAPVIQGSTKNAERELLFDQFRRGEISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAI
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgaccgacggcccattgatcgtgcagtccgacaagacggtgctgctcgaggtcgaccac
gaacaggcgcaggccgcccgcgcggcgatcgccccgttcgccgaactggagcgcgcaccg
gagcacatccacacctaccgcatcaccccgctggcgctgtggaacgcccgcgccgcaggt
cacgacgccgagcaggtggtcgatgcgctggtgtcgttctcccgctacgccgtcccgcaa
cccctgttggtcgacatcgtcgacaccatggcccgctacggccggctgcagctggtgaag
agcccggtgcacgggctggtgctggtcagcctcgaccgcgcggtgctcgaagaggtgctc
cgcaacaagaagatcgccccgatgctgggcgcccgcatcgacgacgacacggtgatcgtg
cacgccagcgagcgcggccgggtcaagcagatgctgctcaagatcggctggccggccgag
gacctcgccggctacgtcgacggtgagcggcacccgatcgatctgctgcaggacggttgg
cagctgcgcgactaccaggagatggccgccgattcgttctggtcgggcggctccggtgtg
gtggtgctgccgtgtggtgcgggcaagacgctggtgggcgccgcggcgatggccaaggcc
ggcgcgaccacgctcatcctcgtcaccaacaccgtcgcgggccggcagtggaaacgcgaa
ctggtcgcgcgcacgtcgctgaccgaggacgagatcggcgagtactccggggagaagaag
gagatccggccggtcacgatcgccacgtatcaggtgatcacccggcgcaccaagggcgag
taccgccacctcgaactgttcgacagccgcgactgggggctgatcatctacgacgaggtg
cacctgctgcccgcaccggtcttccggatgaccgcggacctgcagtcgcgccgccggctg
gggttgaccgccacgctgatccgtgaggacggccgcgagggcgacgtgttcagcctgatc
gggccgaagcgctacgacgcgccgtggaaggacatcgaggcccagggctggatcgcgccg
gccgagtgcatcgaggtgcgggtgacgatgaccgacaacgagcgcatgctctacgccgtc
gccgaacccgaggagcgctacaaattgtgctcgacggtgcacaccaagatcgcggtggtg
cgctcgatcctggagcgccacaagggtgagcagacgctggtgatcggcgcctatctcgat
cagctggaggagttggggcaggaactggacgccccggtgatccaggggtcgacgaagaac
gcggagcgcgagctgctgttcgaccagttccgccgtggtgagatctcgacgctggtggtc
tcgaaggtcgcgaacttctccatcgatctaccggaagcctctgtggccgttcaggtctcg
ggcaccttcggctcgcggcaggaagaagcgcaacggctgggccggctgctgcggcccaaa
cacgacggcggcggtgcggtgttctactcggtggtctcgcgcgacagcctcgacgccgaa
tacgccgcgcaccggcagcggttcctcgccgagcagggctacggctacgtcatcaaggac
gccgacgatctgttgggacccgcgatctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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