KEGG   Mus musculus (mouse): 12826Help
Entry
12826             CDS       T01002                                 

Gene name
Col4a1, Bru, Col4a-1, Raw, Svc
Definition
(RefSeq) collagen, type IV, alpha 1
  KO
K06237  collagen, type IV, alpha
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04926  Relaxin signaling pathway
mmu04933  AGE-RAGE signaling pathway in diabetic complications
mmu04974  Protein digestion and absorption
mmu05146  Amoebiasis
mmu05165  Human papillomavirus infection
mmu05200  Pathways in cancer
mmu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    12826 (Col4a1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    12826 (Col4a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    12826 (Col4a1)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    12826 (Col4a1)
  09154 Digestive system
   04974 Protein digestion and absorption
    12826 (Col4a1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    12826 (Col4a1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    12826 (Col4a1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    12826 (Col4a1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    12826 (Col4a1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    12826 (Col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    12826 (Col4a1)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    12826 (Col4a1)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   12826 (Col4a1)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate/Haparin
  Extracellular matrix molecules
   12826 (Col4a1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Collagen C4
Motif
Other DBs
NCBI-GeneID: 12826
NCBI-ProteinID: NP_034061
MGI: 88454
Ensembl: ENSMUSG00000031502
Vega: OTTMUSG00000021316
UniProt: P02463
Position
8 A1.1; 8 5.53 cM
AA seq 1669 aa AA seqDB search
MGPRLSVWLLLLFAALLLHEERSRAAAKGDCGGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPHGPPGQKGDAGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGI
PGMPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGEQGVSGPP
GVPGQAQVKEKGDFAPTGEKGQKGEPGFPGVPGYGEKGEPGKQGPRGKPGKDGEKGERGS
PGIPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGTMPLGEKGDRGYPGAPGLRGEPGP
KGFPGTPGQPGPPGFPTPGQAGAPGFPGERGEKGDQGFPGVSLPGPSGRDGAPGPPGPPG
PPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGLTGEVGQKGQKGESCLACDTEGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGLIGQPGAKGEPGEIFFDMRLK
GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLKGERGPPGGVGFPGSRGDI
GPPGPPGVGPIGPVGEKGQAGFPGGPGSPGLPGPKGEAGKVVPLPGPPGAAGLPGSPGFP
GPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRPGFNG
LPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGI
RGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPG
LPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIG
PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPG
SPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPGE
KGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKGSKGEVGFPGLAGSP
GIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPPGFPG
INGPKGDKGNQGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGLPGVPGFQGQKG
LPGLQGVKGDQGDQGVPGPKGLQGPPGPPGPYDVIKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt
atggggccccggctcagcgtctggcttctgctgctcttcgccgcccttctgctccacgag
gagcgcagccgagcagctgcgaagggcgattgtggtggctctggctgtggaaaatgtgac
tgtcatggcgtgaagggacaaaagggagaaagaggcttgccagggttgcaaggtgtcatt
ggatttcccgggatgcaaggacctgaggggccacatggaccaccaggacaaaagggtgat
gctggagaacctggacttcctggcacaaaagggacgaggggaccccctggagcagctggc
taccctgggaatcccggacttcctggtattcctggccaagatggccctccaggtccccca
ggtatcccaggatgcaacggtacaaagggagagagagggccgctcggtcctcctggcttg
cctggattcagcggcaatcctggaccaccagggttaccaggaatgaagggagatcctggt
gaaattctcggccacgttcccggaacactgctgaaaggggagagaggatttcctggtatc
cccgggatgccgggctcaccagggttgccaggactccagggacccgtgggtcctccggga
tttactggaccaccgggtcctccaggccctcctggacctcctggagaaaagggccagatg
ggctccagcttccaaggaccaaaaggtgacaagggagagcaaggggtcagcggtcccccg
ggagttcctggacaggcacaagttaaggaaaaaggagactttgccccaacaggagaaaag
ggtcagaaaggtgaacctggatttccgggagtaccaggatatggagagaaaggtgaacct
ggcaagcaagggcctcggggaaaacctgggaaagacggtgaaaaaggagaaagggggagc
ccgggcattcctggcgattccgggtacccaggtctcccaggccggcagggcccgcaggga
gagaagggtgaagctggacttccaggcccccctggaactgtgataggcaccatgcctttg
ggagagaaaggagatcgaggctacccaggagcaccagggttgagaggagagcccggccct
aaaggtttccctggaacaccaggccaaccaggccctccaggtttccctactccaggccag
gctggtgctccaggcttcccaggtgaaaggggagaaaaaggtgaccagggatttccaggc
gtgtcattgccaggaccaagtggaagagatggagccccggggcctcccggccctcccggc
ccccctgggcagccaggccacacaaatggcattgtggagtgtcaacctggaccacccggg
gaccagggccctcctgggactccaggacagccaggtttgacaggtgaagttggacagaaa
ggtcagaaaggagagagctgccttgcctgtgacacagaaggacttcgtggccctccaggg
ccacaggggcctccgggagagattggtttccctggacaacctggggctaaaggtgaccga
ggcctgcccggcagagatggtcttgaaggattgccgggtccacaaggttcaccagggctt
ataggccagcctggagctaagggagagcctggagagatattttttgacatgcgactcaaa
ggtgacaaaggagacccaggttttccgggacagcctggcatgccaggaagagcaggaact
cccggaagagatggccacccaggactccctggacccaaaggctctccgggttcaatagga
ttgaaaggagagcgaggtcctcccggaggagttggcttccctggtagtcgtggagacatc
ggccctcctggacccccaggagttggccccattggtcctgttggtgaaaaaggacaagca
ggctttcctggaggccctgggtccccaggtcttccaggcccaaagggtgaggcaggaaag
gttgtcccactccctggccccccaggagctgcaggacttccaggatcccctggcttccca
gggccacaaggtgaccgaggcttcccaggaaccccaggacgtccaggcatcccgggagag
aaaggtgctgtgggccagccaggaattggatttcctgggcttcctggccccaaaggtgtt
gatggcttgcctggagagataggacggcctgggagtccaggtcgccctggatttaacggc
ttacctggcaacccaggacctcaaggtcaaaagggagaacctggcattgggcttccagga
ctcaaagggcaaccaggccttccaggcattcccggtacacctggagagaagggtagcatc
gggggacccggcgttccaggagaacaggggttgacaggccccccaggactccaggggatc
agaggtgacccagggcctcctggagttcaaggcccagcaggtccaccaggggtcccagga
atagggccacccggagctatgggccctcccggagggcaaggaccaccagggtcatcaggt
ccacctggaattaaaggagagaaagggttccctggattccccggactggatatgcctggc
cccaaaggcgataaaggctctcaaggacttcctggcctcacaggacagtcaggcctccct
ggccttcctggacagcaggggacacctggagttccagggttcccaggttctaaaggtgaa
atgggtgtcatgggaaccccgggacaaccaggctcgccaggaccagcaggcaccccaggg
ttacctggagaaaaaggggaccatggccttccgggctcctcaggacccaggggcgaccct
ggcttcaaaggtgataaaggtgacgttgggcttcctggcatgccaggatccatggagcat
gtggacatggggagcatgaagggacagaaaggagaccagggagagaaaggacaaatcgga
cccactggtgataaaggttcccgaggagaccctggaacaccaggagtacctgggaaggat
gggcaggcagggcatcccggacagccagggcctaaaggtgacccaggccttagtgggaca
ccaggatcccctggactccctggacccaaaggatcagttggaggaatgggcttgccaggt
tcgcctggagaaaaaggtgtgcctggcatccctggctcacagggtgtccctggctcacct
ggagagaagggagccaaaggagagaaagggcagtcaggtctacctggcattgggattccg
ggacggcctggtgacaagggagaccagggccttgctggcttcccaggcagccccggtgag
aagggagagaaaggcagtgccggaaccccagggatgccagggtccccaggcccgagaggt
tctccggggaacatcggccatccaggaagcccaggcctgcctggagagaaaggggataaa
ggcctcccaggactggatggcgttcctggtgtcaaaggagaagcaggtctccctgggact
cctggccccacaggcccagctggccagaagggagagccgggcagcgatggaatcccgggg
tcggcaggagagaagggtgaacaaggtgttccaggaagaggcttccccggcttccctggc
tccaaaggagacaaaggctccaagggtgaagtgggtttccctggcctagctggaagtcct
ggaattcctggagtcaaaggcgagcaagggttcatgggtcctcctggccctcaaggacaa
cctggcttacctggcactcctggtcaccctgtggaggggcccaaaggagaccgaggacct
cagggtcaacctggcctgccagggcatccgggacctatggggccgccagggttcccagga
atcaatgggccaaaaggtgacaagggaaatcaaggttggccaggagctccgggggttcca
ggccctaagggagacccaggattccaaggcatgccgggcattggcggctctccagggatc
acaggttcaaagggagatatgggactgcccggagttccaggatttcaaggtcagaaaggg
cttcctggtctgcagggagtgaaaggagaccagggagaccaaggtgtacccggccctaaa
ggtctccaaggtccccctgggcctccaggtccctacgatgtcatcaaaggagaaccaggg
ctccctggtcctgagggtccccctggtcttaaaggactccagggaccaccaggtccaaaa
ggacagcaaggtgtgacaggctcagtgggcttgcctggacctccaggtgtccctgggttc
gatggtgctcctggccagaaaggagagacaggaccctttggaccacctggtccaagaggg
tttcctggcccaccaggccccgatgggctgccaggatccatgggtcccccaggtacccca
tctgtggaccatggcttccttgtgaccaggcatagtcagacaacagatgacccactgtgt
cccccagggaccaaaattctttaccatggatactctctgctctatgtccaaggcaacgag
cgtgcccacgggcaggacttgggtacggctggcagctgcctgcgtaagttcagcaccatg
ccctttctcttctgcaacatcaacaacgtctgcaacttcgcctccaggaacgactactct
tactggctgtccacgccagagcccatgcccatgtccatggcacccatctctggggacaac
atccggcccttcattagcaggtgtgcggtttgtgaagcaccggccatggtgatggcggta
cacagtcagaccattcagattccgcagtgccctaacggttggtcctcactgtggatcggc
tattccttcgtgatgcacaccagcgctggtgctgaaggttccggccaagccctcgcatcc
cccgggtcctgtctggaagagtttagaagcgccccattcatcgagtgccacggcagagga
acgtgcaattactacgcaaatgcttacagcttttggctcgccaccatagagagaagcgag
atgttcaagaagcccacgccatccaccttgaaggcaggggagctgcgaacacacgtcagc
cgctgccaagtgtgcatgagaagaacataa

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