KEGG   Mus musculus (house mouse): 13207
Entry
13207             CDS       T01002                                 
Symbol
Ddx5, 2600009A06Rik, G17P1, HUMP68, Hlr1, p68
Name
(RefSeq) DEAD box helicase 5
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
mmu05202  Transcriptional misregulation in cancer
mmu05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    13207 (Ddx5)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    13207 (Ddx5)
   05205 Proteoglycans in cancer
    13207 (Ddx5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    13207 (Ddx5)
   03009 Ribosome biogenesis [BR:mmu03009]
    13207 (Ddx5)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     13207 (Ddx5)
Spliceosome [BR:mmu03041]
 Complex A
  U1 snRNP components
   U1 related factors
    13207 (Ddx5)
 Complex B
    13207 (Ddx5)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    13207 (Ddx5)
SSDB
Motif
Pfam: DEAD Helicase_C P68HR ResIII Helicase_C_2 Cas3-like_C_2 ERCC3_RAD25_C BNIP2
Other DBs
NCBI-GeneID: 13207
NCBI-ProteinID: NP_001342605
MGI: 105037
Ensembl: ENSMUSG00000020719
Position
11:complement(106671181..106680011)
AA seq 615 aa
MSSYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSNLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMHNGMNQQAYAYPATAA
AAPMIGYPMPTGYSQ
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtcgagttattctagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttggagggagtagaacaggacccctctctggaaagaagtttggaaatcctggggagaaa
ctagttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggcaaggcgcaccgcacaagaggtagatacatacagaagaagcaag
gaaattacagttagaggtcacaactgtccaaaacctgttctgaatttttatgaagcaaac
tttcctgcgaatgtcatggatgtgattgcaaggcagaactttactgaacccactgctatt
caagctcagggctggccagttgctctcagtggattggatatggttggagtagctcagact
ggatctgggaaaacattatcttatttgctgcctgccattgtacacataaaccaccagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcaccaactcgagaactggca
cagcaggtgcagcaagtggctgctgaatattgtcgagcttgtcgcttgaagtctacttgc
atctatggtggtgctcccaaaggaccacagattcgtgatttggaaagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaatctgaga
agaacaacttaccttgtccttgatgaagctgataggatgcttgatatgggatttgaaccc
cagataaggaaaattgtggatcaaataagacctgataggcaaacactaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatatc
aatattggtgcactggaactgagtgcaaaccataacattcttcagattgtggatgtatgt
catgatgtcgaaaaggatgaaaagcttattcgtctgatggaagaaatcatgagtgagaag
gagaataaaactattgtttttgttgaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggcatccatggtgacaagagtcagcaggaacgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctaccgatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgggaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggacgatcgtcgtgacagatactctgcaggc
aaaaggggtggatttaatacctttagagacagggaaaactatgacagaggctactctaat
ctgcttaagagagattttggggctaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtatctgctggcatacagaccagttttaggact
ggtaatccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaat
gttgcaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctaccgcagct
gctgcgcctatgattggctatcccatgccaacagggtattctcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (49)   
   RefSeq(nuc) (3)   
   GenBank (23)   
   EMBL (23)   
Protein domain (8)   
   Pfam (8)   
All databases (134)   

Download RDF
DBGET integrated database retrieval system