KEGG   Mus musculus (house mouse): 171395
Entry
171395            CDS       T01002                                 
Symbol
Pkd1l1, AA444596
Name
(RefSeq) polycystic kidney disease 1 like 1
  KO
K04987  polycystin 1L1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    171395 (Pkd1l1)
   04040 Ion channels [BR:mmu04040]
    171395 (Pkd1l1)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   171395 (Pkd1l1)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   171395 (Pkd1l1)
SSDB
Motif
Pfam: REJ Polycystin_dom PKD PLAT PKD_4 Ion_trans ig
Other DBs
NCBI-GeneID: 171395
NCBI-ProteinID: XP_036013024
MGI: 2156538
Ensembl: ENSMUSG00000046634
Position
11:complement(8782025..8924365)
AA seq 2551 aa
MLLLSFSNPPPGISHTCNLSASWYHPESSSPLTQHPPRATLVTQPENVEHFAICCFPETD
AQALPALGIRVHVASGTALCLLLDFGDNCGAQMRLCTLAGATTVTGYHQYRKEGVYELKA
VVHDFHRAEELGPYYVDISHGNVSVFMNSSSIHDSEALSFADSLPQQRGTVVVHCFSSIS
SYNVSFISQTQVASGQAWCGVTVGYKMQSVSVYTNGTVFAANTNITFVAITEETIPLEFA
WYFGENPPVMTTSRSIRRRLSVPQWYRVKVKATSRIGSVVSEPHLIRVQKRIMANRLVST
ASALVNANVSFECRLNFGTDVAYLWNFGDDTIELGSSSSSHVYSREGEFTVEVLAFNNVS
STTLRKQLFIVREPCQPPPVKNMGPAKVQIWRSQPLRLGVTFEAAILCNISQGLSYTWSF
VSAEMTTVTLPTAVNTRRQTIMLPSYTLECGNYTAIAKVQIKGSMVYSNYCVGVEVRARA
PVSVISEGTHIFISTATSTFIILRGAQSYDPDNPGAALRYHWTCTAASSPRWPCFDNSTS
YQVDTQAPAISFPAKWLSECCDQFLVTLTVSSRGQNSSQALMFLSTRPDLAFRFVHISWV
NFRDISVNWNEEVSLRAVCEDCGDVPDLTYSWDLFLVNATEKSAVEVPFCSTVGLLGALA
LGTSLKSSKSDLPSNLRAPLTPHSPEPSPTPLGWTALSNLGSISAESTAGGHHVPASGAV
AGSGEPMEEYSSLSSLAEEALMTNSSEGSWPSPSSSTDFDDFEAYYSDIQEAVLSLGRQP
GTSTNFQEAGPSLSAEESASYGDNLLGPFLHTGRAKPTLMIDWPKALVSQAAFHGYTTSG
IMGPAVTIKPFSLSSGKTYVLQASVASKHVLLGKAQLYLTVNQAPQDMSCQVRPHHGMEA
YTIFSVFCMSGKPDFHYEFRYRIGNTSSHTLYRGQDTQHYFLLPAGDSSDNYKVIVSTEI
TDGHGSKVQPCTVAVTVLPRYHGNDCCDKELYNSTLESLSTLRLAGSYMETRNYITMITG
ILSRLYVESRNTSSCGQWSQIQDVLISSACKVPYTDQEGMMDSIHILRDLISFPNKLSLT
SAMCIFKYTKMFLAQGQFSRRLLVDKKLRVEFVLLISGVWEAAKEDARDGDYLQEEGMKI
ISDMLLACLSDEHQIHVSTGQMEFQTLLHRSPQSSIQNLGFVQVHFPSDLASLHSTTQEA
TQSSCYISQLMFFMKSPYLGGQVPGQVGGVMIPRLYSCESRRPILRGQLETPVTMEFGEE
DYLVKHKRNPAMFVLLRDEVNVHRFTGLSENSQESLQIHIKFSKPVTRPFPIILLVRFSE
KATPSDFLVKRVYFWDEQTVQMYVPAAPWKGANVGYLSLLDADYDRKPPNKYLAGAVNYT
VHFQWIQCVFWDKTEWRSEGPYPQPGSSPEKVNCSYHHLAPVSVLRRKLNATLEVSSISE
FQSHPHNLLPGIFSAFLLVLYGILVSKSRYVDCHEKKNPGFIFLEEDTLPGYQLYAVVID
TGFRSPVRFTSKVFIVLCGENGCSETKELCCPEKPLFGRNSRHTFILSIPNQLGPLQKIR
LWHDSSGSSPCWFISHVMVKELCSGQAWFFSAQCWLAVSKLGGHVLREFFCLSHGLGFWK
LFYSKFTEYLEDFHIWLSLYSQPPSRSYLHTQRLAVSFCLLCVYSCLTALVTVRDHQQRP
LDVGPTAITLEPFCMALLCTLLACPVAQLLSLLFRCSKEARGDMQASTQWPLRGVKTETP
QGHDSSGRPDSRQPSPHPTSDLLPWNDQAWRIAASSSAVVCSPFPMEACSHKHHDLREKS
HYSPPSSQAPGSGFEELGSQKSRVCLLWSSSVAWAISGSASLACGLGTGFLGYWFVPAQC
MWWLYLLLLSLVCCAFITQPLMICLAALVFAWKRKHDSKFFTESLQDATKGLDLELEEHS
RTRVPLSPISYSPDTAEEAERVLATRQRERHLRWAQTPSKAKLRVTGERLRRESIMQAAL
RDMTTHSIMLLLLLFIAYGRFCPGEISLNHAIRKAFTRKANHSLGDLSSTEDWWDWTLST
LLDELYPERTSARAWGAQPGALGGQCHLIGPPVVKLLKISAGTACTPPRPFSELVEDVLP
MHSNDLDLENQNVSPGGPETCGVKKESYMHSLGKTRHEAHAALTALRASKWIDHSTRAMS
VHFTLYNPPTQLFTSVILGTECLPSGGLVPSFLVESFRIFYSDSALKYLLMLSELLFLVL
NVIHLCFQLWGMTTKGILSYWRKPRHWLELSMVGVAIAYYAASGHLTTLAVNITDQFHKG
LYQRLVDIGLMVSWHQRARCLQGILLFLWMLKYVHLLSSLSTMTPFSAVTCFPLFRVLLV
GALLLAAHYHSRWFLLFTGTLSHGTSAEAFPGLLLQFPGRSKKDSWHNCLKSDHGVMRCY
YGTLFLLLATLGFRMLRATFLTVFQNRKSSHRKPLVTLKDIAVYTWHKVLTLLGLETTLE
ETEVATDHIYYLDEFSSLLDELLMKIDGLSDSLELSILENQWKRALESRAGDSPPVGSSE
YQATGVPLEARREHYTRIPWNPTYRHLSTVR
NT seq 7656 nt   +upstreamnt  +downstreamnt
atgctgcttctgagcttctccaaccctcctcctggcatttctcacacctgcaacctctct
gcatcctggtatcatcctgagagttccagtcctctcactcagcatcctcccagggccacc
ttggtgacacagcctgaaaatgttgagcactttgccatctgctgcttcccagaaacagat
gctcaggcacttccagctctgggaatccgtgttcacgtggcttccggaacagctctttgt
ctgctgctggactttggggacaattgtggagctcagatgagactgtgtacattggcaggt
gcaactactgtgactggctaccatcagtacaggaaagaaggagtctatgagctcaaggct
gttgtccatgactttcatagagccgaggaactggggccctattatgtggacattagccat
gggaatgtgtctgtcttcatgaattccagctctatccatgatagcgaagctctttccttt
gctgactccctcccacagcagagaggcacagtcgtggtgcattgtttttcatccatttct
tcatacaatgtgtcctttatttctcagacccaagtggccagcggccaggcctggtgtggt
gtgactgttgggtataagatgcaatccgtgtctgtctataccaatggaactgtgtttgct
gctaacacaaacatcacatttgtggctattaccgaggaaactatacccctggagttcgct
tggtatttcggagagaacccaccagtgatgacaacttccagaagcattagaagaaggctg
agcgtccctcagtggtaccgtgtgaaggtcaaggccaccagcaggatcggcagtgtggtc
tctgaaccccacctcatcagggtgcagaagagaatcatggccaatcgacttgtgtccact
gcctcagccctggtaaatgccaatgtgtcctttgagtgcaggctcaactttggcactgat
gtagcctacctttggaactttggagatgacaccattgagttgggcagcagctcctccagc
catgtctacagcagggagggagagtttacagttgaagtccttgccttcaataatgtcagc
tccactaccctaagaaagcagcttttcatcgtgcgggagccttgccaaccacccccagtg
aagaacatggggcctgcgaaggtgcagatatggaggtctcagcccctgagactaggagtg
acatttgaagctgccatcctctgtaacatttcccaagggctttcctacacctggagcttt
gtgagtgctgagatgaccactgttaccctccctactgctgtcaacacccgcagacagacc
atcatgctcccaagctacacactggaatgtgggaactacaccgccatcgccaaggttcag
atcaagggaagcatggtgtatagcaactactgtgttggtgtagaagttcgagctagggcg
cctgtcagcgtcatctctgaaggcacacacatcttcatctccacggccacctcaaccttc
atcatcctcagaggggcccagtcctatgaccctgacaacccaggggctgctctcaggtat
cactggacttgcacagcggccagctcaccaaggtggccctgctttgataactctacttca
taccaagtggacacgcaagctcctgccatttccttcccagcaaaatggctcagtgaatgc
tgtgaccagttccttgtgacactgacggtctctagcaggggacagaactcatcacaggcc
ttgatgttcctgtctacccgtcctgacttggccttcagattcgtccacatctcatgggtc
aactttagagacatctctgtgaactggaatgaagaagtgtctctccgggctgtgtgtgaa
gactgtggagatgtcccagacctcacgtattcctgggacctcttcctagtcaatgcaaca
gagaagagtgcagtggaagtccccttctgtagtactgtggggctgctaggtgccttggca
cttgggaccagtctgaagtcctctaagtctgatctgccatcaaatctgagagcaccactg
acaccacactcaccggagccttcacccacgcctctgggctggacagctctttccaacctg
ggaagcatttctgctgagtccacagctggtggccaccacgttcctgcttcaggagctgtg
gcaggctcaggggagcctatggaggagtatagctcactgagttccctggctgaggaagcc
ctgatgacgaacagctctgagggaagctggccctcccccagctcttccactgactttgat
gattttgaagcctattatagcgacatccaagaagcagtgctatccctaggaagacaacca
gggaccagtacaaacttccaggaagcaggaccaagcctgagtgctgaggagagtgccagt
tatggggacaacctgctgggccctttcctccacacaggtagagcaaagccaactctcatg
atcgactggcccaaggccctggtcagccaagctgccttccatggctacaccacatcaggt
atcatgggaccagctgtgacaataaaaccattctcactgagcagtggcaagacatatgtc
ttacaagcttctgtagcttcaaagcatgtcttactgggcaaggctcagctctacttaacg
gtcaaccaagctccgcaggacatgtcttgtcaggtgcgaccccaccatggtatggaggca
tataccatcttcagtgtcttctgcatgtcagggaaaccggactttcattatgaatttcgt
taccggataggaaacacttcctcacataccctgtaccgtggtcaagacacccagcattat
tttttattgccagctggtgattcttcggacaattacaaagtcattgtttcaactgagatc
acagatggccacggctccaaggtgcagccatgcactgtggcggtgactgtgctaccccgt
taccatggaaatgactgctgtgacaaggaactatataactccactctggaaagcctgtct
actctccggctggcaggaagttacatggaaaccaggaactacattaccatgatcactggg
atcctgagccgcttgtatgtggagagcagaaacacttcttcgtgtggtcagtggtcacaa
atacaggatgtattaatttcttcagcatgcaaagtaccttatacagatcaggaaggaatg
atggattctattcatatattgagagacctcataagcttccctaataagttgagcttgacg
agtgccatgtgcatcttcaaatacaccaagatgttccttgctcaaggccagttctccagg
aggttgctagtcgacaaaaaactaagagttgaatttgtccttctcatctctggagtctgg
gaagctgccaaagaggatgcgagggatggggactatctgcaggaagaaggcatgaagatc
atctctgacatgttactagcctgtctctcagacgagcatcagattcacgtaagcactggg
cagatggagttccagacccttctccatcgtagccctcagagctctatccagaacctaggc
ttcgtccaggtacatttccccagtgacctggcctccttgcacagtactactcaagaggca
acacaaagctcatgctatatcagccagctcatgttcttcatgaagagtccttatctaggg
ggacaagttcctgggcaggtgggtggtgtcatgatccctaggctctatagctgcgagagt
agaagacctatcctcagaggacaactggagacacctgtgactatggagtttggggaagaa
gactacctggtaaagcacaagagaaatccagccatgtttgtgttgcttcgggatgaggtg
aatgtccaccggtttactgggctttcagaaaactcccaggaatctttacagatacacatc
aaattctctaagcccgttacaagaccctttcccatcatactgttagtaaggttctctgag
aaagccacgccttctgattttcttgtgaagcgggtctacttctgggatgagcagactgta
caaatgtatgtacctgctgctccatggaaaggagccaatgtgggatatttatcgctatta
gatgctgactatgacaggaaacctccaaacaaatatcttgctggggctgtaaactataca
gtgcatttccagtggatccaatgtgtgttctgggacaagacagagtggcgatctgaaggt
ccctatccacagccaggatcgtctcctgaaaaagtcaactgcagctaccatcaccttgca
cctgtctctgtcctaagaagaaagctgaatgccactcttgaagtgagcagcatttctgag
tttcagagtcacccacacaacttgctccccggtattttcagtgcatttctcttggttctt
tatggaattttggtgagtaaaagcagatatgtagactgtcatgagaaaaagaatccaggt
tttatttttctggaagaagatacactgcctggctaccagctgtatgcagtcgtcatcgac
actggcttccggtcaccagtcagatttacctcaaaggttttcattgttctatgtggtgaa
aatggatgctcagaaacgaaagaactctgttgtccagagaagcccttatttggaaggaat
tccaggcacaccttcattctgagcatacctaaccaactgggtccactccagaagatccgc
ctctggcacgacagtagtggatcttccccatgctggttcatcagccacgtgatggtgaag
gagctatgctcaggacaagcctggttcttctctgctcagtgctggctggctgtgagcaaa
ttgggtggccatgtattacgagaattcttctgcctgagccatggtctcggtttctggaag
cttttctattcaaagttcactgagtacctggaggatttccacatctggctctcactgtac
agtcagcccccatccagaagctacctacacacacagcggcttgccgtgtccttctgcctg
ctgtgtgtctactcgtgcctcactgccctggtcactgtgcgagaccatcaacagcgcccc
ctggatgtggggcccacagctatcactctggaacccttctgtatggctctactgtgcacc
ctcctggcctgtccagttgcacagcttctgtcactgctcttcaggtgcagcaaggaagcc
agaggggatatgcaggcttcaacacagtggcctctaagaggagtgaagacagagacacct
cagggccatgattccagtgggagaccagattcaaggcagccctcaccacatcccacatca
gaccttctcccctggaatgaccaagcttggaggatagcagccagcagcagtgctgtggtc
tgttcaccgttcccaatggaggcctgcagccataagcatcatgatctgagagagaagagc
cattactctcctcccagttcacaagctcctggcagtggttttgaagaacttgggtcccag
aagtcaagggtctgtctgctctggtcaagctctgtggcctgggctatctctggatcagct
tccctggcctgtggtttggggacaggattcctaggctactggtttgtgccagcacagtgt
atgtggtggctatacctgctgcttctctctctggtctgctgcgcattcatcacccagcca
ctcatgatctgcttggcagcacttgtctttgcttggaaacggaaacatgacagcaagttt
tttactgagtctttacaagatgcgaccaagggtctggatttggaattggaagaacattcc
agaacccgtgttcctctttctcctatctcctatagtcctgacactgctgaggaggctgaa
agggtcttggctacccgacaacgagaacgccacctgcgctgggctcagacaccatccaag
gctaagctcagagtgaccggggagagactgaggagagagagcatcatgcaggcagccctg
agagacatgaccacacacagcatcatgctactgctgcttttgtttatagcatatgggaga
ttctgcccaggtgaaatttctctcaatcatgccatcaggaaagcatttacaagaaaggcc
aatcactccttgggggacctcagcagcacagaagactggtgggactggacgctgagcaca
ctgctagatgagctgtacccagaaagaacatctgctagagcctggggggctcagcctgga
gctcttggagggcaatgccacctaataggccccccggtggtcaaactgctgaagatttct
gctggcactgcatgcacgcctcccagaccattctcagagcttgtggaagatgtacttcct
atgcacagcaatgaccttgaccttgagaaccaaaatgtgtcccctggcggccctgagacc
tgtggcgtgaagaaagagagctacatgcatagcctaggaaaaacaagacatgaagcccat
gcagctctgactgccctcagggctagcaagtggatcgaccacagcacaagggccatgtct
gtgcacttcactctctacaaccctccaacacaactcttcacaagcgtgatcctgggcaca
gaatgtctcccctcaggaggtcttgtcccctcattcctggtagagtccttccgcatcttc
tacagtgactcagccctaaagtaccttcttatgctttctgagctgctgttcctggtactc
aacgtgatccacctctgtttccagctctgggggatgacaaccaagggcatcctcagctac
tggagaaaaccaagacactggctggagctctctatggttggagtagcaatagcctactat
gcagcctctggtcacctcactactcttgctgtgaacatcaccgaccagttccacaaagga
ctttatcagaggcttgtggacatcggcctgatggtgtcatggcatcagagggcgcgatgc
ctccaaggaatcctcttgttcctctggatgttgaaatatgttcatcttctcagctctcta
agcaccatgacacccttctcagcagtgacctgttttcctctcttcagagtcttgctggtg
ggggccctattgctggctgcccattaccactcgcgctggtttctgctcttcaccgggaca
ctgtcacatggcacctcggcagaagcatttcctgggctactgcttcaatttcctggaaga
agtaaaaaagactcatggcataactgtttgaagtctgaccacggagttatgcgttgttac
tatgggaccctctttctgttgctggctactctgggtttcagaatgttgagagctaccttc
ctgactgttttccaaaacagaaagtcttctcacagaaaacctctcgtgacacttaaagac
attgctgtttacacatggcataaagtcctcacccttctggggctggaaacaactttggaa
gagactgaagtggctacagaccatatttattacctggatgaattttcaagtctcttggat
gaacttctgatgaagatcgatggtttgtctgacagcctagaactttctatcctagaaaac
caatggaagagagcactagagtcaagggcaggtgacagtcctccagttggcagttcagag
taccaagctactggggtacctttggaggccagaagagagcactatactcggatcccctgg
aaccctacttataggcacttgtcaacagtcagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (113)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (105)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (7)   
   Pfam (7)   
All databases (136)   

Download RDF
DBGET integrated database retrieval system