KEGG   Mus musculus (house mouse): 67533
Entry
67533             CDS       T01002                                 
Symbol
Ppfibp1, 4632409B19Rik
Name
(RefSeq) PTPRF interacting protein, binding protein 1 (liprin beta 1)
  KO
K27096  liprin-beta
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    67533 (Ppfibp1)
Membrane trafficking [BR:mmu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    67533 (Ppfibp1)
SSDB
Motif
Pfam: SAM_1 SAM_2 SAM_PNT DUF16
Other DBs
NCBI-GeneID: 67533
NCBI-ProteinID: NP_080497
MGI: 1914783
Ensembl: ENSMUSG00000016487
UniProt: Q8C8U0
Structure
Position
6:146788107..146933523
AA seq 969 aa
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMETDEKEGLRCQIPDSTAEVLIEWLQNQMTNGHLPGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLELMAEISNLK
LKLTAVEKDRLDYEDRFRDTEGLIQEINDLRLKVNEMDGERLQYEKKLKSTKDELASLKE
QLEEKECEVKRLQERLVCKAKGEGIEVLDRDIEVQKMKKAVESLMAANEEKERKIEDLRQ
CLSRYRKMQDPAVLAQGQDSECEGLFHSSSISTLLDAQGFSDLERSTSSTPGMGSPSRDL
LHTSAPEEFHTSVLQASIPSLLPPSVDVDTCEKPKLPTKPETSFEEGDGRAILGAAAEVS
LSDGVSTSSLQKSSSLGNLKKEASDGTDKAPTDSRTFGTLPPKVPGHEASVDDNPFGTRK
ARSSFGRGFFKIKSGKRTASAPNLAETEKETAEHLNLAGTSRSKGSQGTSPFPMSPPSPD
SRKKSRGIMRLFGKLRRSQSTTFNPDDMSEPEFKRGGTRATAGPRLGWSRDLGQSNSDLD
MPFAKWTKEQVCSWLAEQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKL
QLALQALGSEEETNYGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSL
KVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENSITPSEVQQWTNHRVMEWLRSVDL
AEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPNKTLLRRHLATHFNLLIGAEAQHQ
KRDAMELPDYVLLTATAKVKPKKLTFSNFGNLRKKKHEDGEEYVCPMELGQASGSSQKGF
RPGLDMRLYEEDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDDMFKDFAARSPSA
SITDEDSNV
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgatgagtgacgctagtgacatgctggccgcggcgctggagcagatggacggaatcata
gcaggttctaaagccttggagtattccaatgggatttttgattgccaatctcccacctcc
ccatttatgggaagcttgcgcgctctgcaccttgtggaagacctgcgtggattgttggag
atgatggaaacggatgagaaggaaggattgagatgccagatcccagattcaacagcagaa
gtgcttattgagtggcttcaaaatcaaatgacaaatggacatctacctgggaatggagat
gtgtatcaagaaaggttggcacgtctagaaaacgacaaggaatccctcgttcttcaggta
agtgtgttgacagaccaggtggaggctcagggagagaagattcgggatttggagttctgt
cttgaagagcacagagagaagctgaatgccactgaagaaatgctgcagcaggagcttctg
agtaggacctccttagagacacagaagctggagctgatggctgagatctctaacttgaag
ttaaaactgacggccgtagagaaggacaggctggattatgaagatcggttcagagacaca
gaggggctaattcaagagatcaatgatttgaggctaaaagtcaatgaaatggacggtgaa
agacttcagtatgaaaagaagctcaagtcaactaaagacgaattggcatctttaaaagag
caactggaggagaaggaatgtgaagtaaagaggctgcaggagagactggtttgtaaggcg
aaaggagaagggatcgaagtcctcgatcgagacattgaagtacagaaaatgaagaaggca
gtggagtctctgatggcagcgaatgaagaaaaggagcggaaaatagaagacctgcggcag
tgcctgagcaggtacaggaaaatgcaggacccagcagttctggcccaaggtcaggatagt
gagtgtgagggcctgttccattccagctctatctccaccctgttggatgcacagggtttt
agtgatctggagagaagcacttcttctacgccaggaatggggtctcccagcagggacctg
ctccacacgagtgctccagaagagtttcacaccagcgtcttgcaagcttcaatcccttca
ctattgccgccatctgtggatgtagacacttgtgaaaaacccaagttgcctaccaagccc
gagacttcatttgaagagggtgacggaagagcaatcctgggcgctgccgctgaagtctcc
ctgagtgatggtgtttcaacttcaagtctgcagaaatctagcagccttggaaatctgaag
aaagaggcatcggatggcacggataaagctccgactgacagccgcacgtttgggaccctg
cctcccaaggtcccaggacacgaagcctctgtggatgacaacccctttggcactcgcaaa
gccaggtcctcatttggccggggcttttttaaaatcaaaagtggaaagaggacagcaagt
gcacccaaccttgctgagacagaaaaagagacagctgagcacctgaatttggctggtaca
tctcggtcaaaaggttcccagggaaccagtccattcccaatgtctccaccatctccagat
tccagaaagaaatccagaggcatcatgagactctttgggaaacttagaagaagtcagtca
actacattcaacccagatgacatgtctgagcctgaattcaaaagaggagggacaagggca
actgcaggacccaggcttggttggtctcgagatttaggacagtccaacagtgacctggat
atgccatttgccaaatggaccaaggagcaggtgtgtagctggctggcagagcaaggcttg
gggtcctacctgagttctggcaagcactggattatatctggccagacccttttgcaggct
tctcagcaggatctggagaaggaacttggcatcaagcattcactgcatcgtaagaagctc
cagctggccctgcaggccctgggatctgaagaagaaaccaactatgggaagctagacttc
aactgggttactagatggctggatgatattggcctccctcagtacaagacccagtttgat
gaagggcgggtggacggtcgaatgctgcactacatgactgtggatgacctactgtccctg
aaggttgtcagtgtgctgcaccatctcagtatcaaaagggccatccaagtgctgaggatc
aataactttgagccaaactgtctaaggaggcggccgtctgatgagaatagcatcacccca
tctgaggttcagcagtggaccaatcatcgtgtgatggagtggcttcgctctgtggacttg
gcagaatatgcccccaatctcagaggcagtggtgtccatggagggctcatggttcttgag
cctcgttttaatgtagaaactatggcccagttactgaacattccaccaaataaaaccttg
ttgcgcagacatttggcgacccatttcaaccttctgattggtgcagaggcccagcaccag
aagcgagatgccatggagttaccggattatgtactgctaacagccactgccaaagtgaag
ccgaagaagctgacctttagcaactttgggaatctgaggaagaagaaacatgaagatgga
gaggaatatgtttgtccgatggagctaggccaggcatcaggtagctcccagaaggggttt
agacctggcttggacatgcgcctgtatgaagaggatgatttggatcggttagagcagatg
gaagattcagaagggacggtgagacagataggtgcattttctgaaggcatcaacaatctc
acgcacatgttaaaggaagatgacatgtttaaggattttgctgcccgctccccgagtgcc
agcatcacagatgaagactccaacgtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (24)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (22)   
DNA sequence (56)   
   RefSeq(nuc) (22)   
   GenBank (17)   
   EMBL (17)   
3D Structure (3)   
   PDB (3)   
Protein domain (4)   
   Pfam (4)   
All databases (110)   

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