KEGG T01002: 71990

Mus musculus (house mouse): 71990

Entry

71990             CDS       T01002

Symbol

Ddx54, 2410015A15Rik, DP97

Name

(RefSeq) DEAD box helicase 54

K14808

ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]

Organism

mmu Mus musculus (house mouse)

Brite

KEGG Orthology (KO) [BR:mmu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmu03009]
    71990 (Ddx54)
Enzymes [BR:mmu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     71990 (Ddx54)
Ribosome biogenesis [BR:mmu03009]
Eukaryotic type
  Pre-60S particles
   Helicases
    71990 (Ddx54)

SSDB

Motif

Pfam:

DEAD Helicase_C DBP10CT ResIII

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

MGI:

Ensembl:

UniProt:

Position

5:120751182..120766657

AA seq 874 aa
MAAGRRVGPGPPSRPTMAPWKKKRLRKRRTGASQGRDSDSDDGEFEIQAEDDARARKLGP
GRALPSFPTSECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTP
IQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQ
TMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSV
EYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL
DVDSKLNEQLKTSFLLVREDTKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQ
GVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKL
FLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSVTLARPCEEPSVADAVGRDGV
LGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQQYVRSRPAPSPESIKRAKELDL
AELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFEINASSKDPSSQMMRAKRQRDRK
AVASFQQRRQERQEGPADPAPQRELPQEEEEEMVETVEGVFTEVVGQKRPRPGPSQGAKR
RRMETRQRDQEFYVPYRPKDFDSERGLSVSGAGGAFEQQVAGAVLDLMGDEAQNMSRGQQ
QLKWDRKKKRFVGQSGQEDKKKIKTESGRFISSSYKRDLYQKWKQKQKIDDRDSEEEGPS
NQRGPGPRRGGKRGRSQGTSQPRASSVPAGRMRSELKTKEQILKQRRQAQKQRFLQRGGL
KQLSARNRRRAQELRQGAFGRGAPSRKGKMRKRM

NT seq 2625 nt +upstreamnt +downstreamnt
atggctgctggcagacgtgtgggacctggcccgccgtcgcgtcccaccatggcgccgtgg
aagaagaagaggctgcggaaacgccgaactggggcttcccaaggccgcgacagcgactcg
gatgacggcgagttcgagatccaggcggaggatgacgcccgggcgaggaagctgggccct
ggcagagccttgccctcatttcctacctcagagtgcgtatcagatgtggagcccgacact
cgggagatggtgcgagcccagaacaagaaaaagaagaagtctggaggcttccagtccatg
ggcctgagttaccctgtgttcaaggggatcatgaaaaagggctacaaggtgccgacgccc
atccagaggaagaccatccccgtgatcttggatggcaaggatgtggtggccatggcccgg
acaggcagtggcaagacggcctgcttcctcctcccgatgtttgagcggctgaaggcacgc
agtgcacagacgggggctcgagccctcatcctctcacccacccgggagctggccctgcag
accatgaagttcactaaagagctaggcaagttcaccggcctcaagactgccttgatcctg
ggtggagacaaaatggaagaccagtttgcagccctgcacgagaaccctgacataatcatt
gccacccctgggcgtctggtgcatgtggctgtggagatgaacttgaagctgcagagtgtg
gagtatgtggtgttcgatgaagcagacaggctctttgaaatgggctttgctgagcagcta
caggagatcataggccgccttcctgggggccaccagacggtgctgttctcagctacactg
cccaagctgctggtggaatttgcacgggcaggcctcacagagcccgtgctcatccgcctg
gacgtagactccaagctcaatgagcagctcaagacctccttcctccttgtgcgcgaagac
accaaggctgctgtgctcctctacctgctgcagaatgtcgttcggccccaggaccagact
gtggtgtttgtagccacaaagcaccatgcggagtacctcacagagttgctgatgggccag
ggtgtgagttgcgcccacatctatagtgccttggaccagacggcccgcaagatcaacttg
gccaagttcacacacaacaaatgttccaccctcatcgtgactgacctggccgcccggggc
ctggacatcccactgctggacaacgtcatcaactacagcttccctgccaagggcaagctc
ttcctgcaccgagtgggccgtgtggcccgagcaggccgaagtggcacagcctattctttg
gtggccccagacgaggtcccctacctgcttgacctacacctgttcctgggccgctctgtc
accctggcccgtccttgtgaggagccttcagtggcagatgcggttggcagggacggagtg
ctgggtcgcgtgccccagagtgtagtggatgatgaggacagcagcctgcagactgccatg
ggggcatccctggatcttcagggcctgcaccgcgtggccaacaacgctcagcagcagtat
gtgcgctcacggccagcgccctcgcctgagtccatcaagagagccaaggagctggacctg
gcagagctgggcttgcacccactcttcagctcatgctttgaggagggagagctccaacgc
ctgaggctggtggacagcatcaagaactatcgcacgcgcacaaccatctttgagatcaat
gcctccagcaaggacccaagcagccaaatgatgcgtgccaagcggcagagggaccggaaa
gctgttgccagtttccagcagcggcgccaggaaaggcaggaaggcccagctgacccagcc
ccccagagggagctgcctcaggaggaggaggaggagatggttgagactgtagagggtgtc
ttcacagaagtcgtgggccagaaacggccaaggccgggacccagccaaggagccaagagg
cggaggatggagacccgtcagcgagaccaggagttttatgtcccctaccggcccaaggat
ttcgacagtgagcgggggctgagtgtcagtggggctggaggggcctttgagcagcaggtg
gctggtgcagtcctggacctgatgggggatgaagcacagaacatgagccgggggcagcag
cagctcaagtgggaccggaagaagaagcggtttgtggggcagtcaggccaagaagacaag
aaaaagatcaagacagagagcggccggtttatcagcagctcttacaagcgggatctctac
cagaagtggaagcagaagcagaaaattgatgaccgggactccgaggaagaagggccatcc
aaccagcgaggccctgggccccgcagaggtggaaagcgaggtcgtagtcaaggcacatcc
cagccccgagcttccagtgtacccgcaggccgcatgcgctcggaactcaagaccaaggag
caaatcctcaagcagcgccggcaagctcagaagcagcgcttcctgcagcgagggggcctg
aagcagctttcagcacgcaaccgacgccgagcccaggagctgcgccagggcgcctttggc
cggggtgctccctccaggaagggcaagatgaggaaaaggatgtga

All links

Gene (17)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (56)   
   RefSeq(nuc) (2)   
   GenBank (27)   
   EMBL (27)   
Protein domain (4)   
   Pfam (4)   
All databases (80)   

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