KEGG   Methylobacterium phyllosphaerae: MCBMB27_00344
Entry
MCBMB27_00344     CDS       T04968                                 
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mphy  Methylobacterium phyllosphaerae
Pathway
mphy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mphy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MCBMB27_00344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mphy03400]
    MCBMB27_00344
Enzymes [BR:mphy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MCBMB27_00344
DNA repair and recombination proteins [BR:mphy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MCBMB27_00344
    RecFOR pathway proteins
     MCBMB27_00344
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_3 AAA_14 AAA_22 AAA_17 nSTAND3 AAA_2 AAA_16 AAA_18 Sigma54_activat Rad17 ResIII TsaE DUF815 AAA_33 NTPase_1 RNA_helicase AAA_28 NB-ARC ABC_tran NACHT IstB_IS21 AAA_7 AAA_19 Sigma54_activ_2 AAA_24 Parvo_NS1
Other DBs
NCBI-ProteinID: APT29635
Position
complement(280347..281402)
AA seq 351 aa
MSKPKPPTNALLTPEKRAEDVDQTIRPLSLSEFIGQRAARANMQVFIEAARKTGQALDHV
LFVGPPGLGKTTLAQIVARELGVNFRSTSGPVIAKAGDLAAQLTNLEERDVLFIDEIHRL
NPAVEEILYPAMEDYQLDLIIGEGPAARSVKIELPKFTLVGATTRAGLLTTPLRDRFGIP
IRLEFYEIDELEQIVARGARVLGLGMSAEGANEIARRARGTPRIAGRLLRRVRDFAVVAE
AETVTRAIADRALQLLDVDAAGLDVMDRKYLSLIARSFGGGPVGIETIGAALSEPRDAIE
DIIEPYLIQRGFVQRTPRGRVLTRHAYRHMQLPEPKRETPGQFGFFGDDAP
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgagcaagccgaagcccccgaccaacgcgctactgacgccggagaagcgtgccgaagat
gtggatcagacgatccgccctctgagcctgtccgaattcatcgggcagcgtgcggcgcgg
gcgaacatgcaggtgttcatcgaggcggcgcggaagaccggccaggcgctggaccacgtg
ctgttcgtcggcccgccgggtctgggcaagacgacgctcgcccagatcgtggcgcgcgaa
ctcggcgtgaacttccgctcgacctccggcccggtgatcgccaaggccggggacctggcc
gcgcagctcaccaacctggaggagcgcgacgtcctgttcatcgacgagatccaccggctc
aacccggcggtggaggagatcctctacccggccatggaggattaccagctcgacctgatc
atcggcgagggcccggcggcgcgctcggtcaagatcgagctgccgaagttcacgctggtg
ggcgccacgacccgggcggggctgctgaccacgccgctgcgcgaccggttcgggatcccg
atccggctggaattctacgagatcgacgagctggagcagatcgtggcgcgcggggcgcgg
gtcctgggcctggggatgtcggcggagggggccaacgagatcgcccggcgggcgcggggc
acgccgcggatcgccgggcgtctcctgcggcgggtgcgggacttcgccgttgtggcggag
gccgagacggtgacgcgggcgatcgccgaccgggcgctgcagctgctcgacgtggacgcg
gccgggctcgacgtgatggaccgcaagtacctgagcctgatcgcgcgctccttcgggggc
ggccccgtggggatcgagacgatcggggcggccctgtcggagccgcgcgacgcgatcgag
gacatcatcgagccgtatctcatccagcgcggcttcgtgcagcgcaccccccgcggccgc
gtcctcacccggcacgcctaccgccacatgcagctgccggagccgaagcgcgagacgccg
ggacagttcggcttcttcggagacgacgcgccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (33)   
   Pfam (33)   
All databases (42)   

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