KEGG   Micromonas pusilla: MICPUCDRAFT_6657
Entry
MICPUCDRAFT_6657  CDS       T02696                                 
Symbol
JGI:MicpuC2_6657
Name
(RefSeq) uncharacterized protein
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
mpp  Micromonas pusilla
Pathway
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_6657 (JGI:MicpuC2_6657)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_6657 (JGI:MicpuC2_6657)
   03400 DNA repair and recombination proteins [BR:mpp03400]
    MICPUCDRAFT_6657 (JGI:MicpuC2_6657)
Spliceosome [BR:mpp03041]
 Complex B
  Other components
   Prp19 complex
    MICPUCDRAFT_6657 (JGI:MicpuC2_6657)
 Complex C
   Prp19-CDC5 complex
    MICPUCDRAFT_6657 (JGI:MicpuC2_6657)
DNA repair and recombination proteins [BR:mpp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    MICPUCDRAFT_6657 (JGI:MicpuC2_6657)
SSDB
Motif
Pfam: BCAS2 Spc29
Other DBs
NCBI-GeneID: 9680834
NCBI-ProteinID: XP_003055177
JGI: 6657
UniProt: C1MIR5
Position
Unknown
AA seq 195 aa
LIDALPYADVLPPDWRPLADRMVQEEMRRMTKRPKDYLAEMKPAYEMTYKDCPMIKKEME
RVEKGIMKMPPPDSTRYSLPPPPKSKRDDPEAWEAAVKNAKAQLEHQTLRIQNLELMLKY
GPNQWRAYNASLEAAIKRCARAASDQKAATAELNARRKLRQTAVGEKLQKLEREFYEGCR
KNAELDFAIKKLEAE
NT seq 585 nt   +upstreamnt  +downstreamnt
ttaatcgacgcgcttccgtacgcggacgtcctcccccccgactggcgcccgctcgcggat
cgcatggtccaggaggagatgcgtcgaatgacgaagcgcccgaaggattacctggccgag
atgaagcccgcgtacgagatgacgtataaggactgcccgatgattaaaaaagagatggag
agggtggagaaagggatcatgaagatgcctccgccggactcgacgcggtactcgctcccg
ccgccgccgaagagcaagagggacgacccggaggcgtgggaggctgcggtcaagaacgcg
aaggcgcagctcgagcatcagacgttgcggatacagaacctggagctcatgctgaagtac
gggccgaaccagtggagggcgtacaacgcgagcctggaggcggcgatcaagaggtgcgcg
cgcgcggcgtctgatcaaaaggcggcgaccgcggagctcaacgcgcgacgaaaactgaga
cagaccgcggtcggggagaagctccagaagctcgagcgcgagttttacgaggggtgccga
aagaacgccgagctcgacttcgccatcaagaagctcgaggcggag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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