KEGG   Allomuricauda ruestringensis: Murru_0482
Entry
Murru_0482        CDS       T01598                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mrs  Allomuricauda ruestringensis
Pathway
mrs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mrs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Murru_0482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mrs03021]
    Murru_0482
   03019 Messenger RNA biogenesis [BR:mrs03019]
    Murru_0482
Transcription machinery [BR:mrs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Murru_0482
Messenger RNA biogenesis [BR:mrs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Murru_0482
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 OB_RNB DDHD AAA_22 Mor Spore_III_AA AAA Presenilin
Other DBs
NCBI-ProteinID: AEM69536
UniProt: G2PSQ9
Position
485111..486730
AA seq 539 aa
MFEISDLKAKKLPELQEIAKGLNVPKFKSLKKLDLVYQILDVQASNPKAVAETVTSTTDE
KPAPAPKKPRAPRPKATEAKSTEGDAPKKAPQKREPRSKKDDSKPQGKPQKKDNKPQDNK
SQDNKSHSSSQKNQNTRRSNQHNKPHHDKKNSNFDKDLRNRYKEPEYEFDSIIESEGVLD
IMQDGYGFLRSSDYNYLSSPDDIYVSQSQIRLFGLKSGDTILGNIRPPKEGEKYFPLIKV
NKINGLDPQVVRDRVAFEHLTPLFPKEKFKLAEKQSTISTRIMDLFSPIGKGQRGMIVSQ
PKTGKTMLLKDIANAIAANHPEVYQIILLIDERPEEVTDMQRNVRGEVVASTFDKEATEH
VRVANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALHKPKR
FFGAARNIENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRRISNRRIFPAID
LISSSTRRDDLLLDENTIQRMWIMRKYLADMNPIEAMEFMEQRIKQTKNNEEFLLTMNE
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgttcgagatttcagatctaaaagctaaaaagcttcctgagttgcaagaaattgcaaag
ggtcttaatgttcccaaattcaaatcattgaaaaaattggacctggtttaccaaatattg
gacgttcaggcttccaacccaaaagctgttgcagaaacggttacatcaaccacagacgaa
aagcctgccccagcaccaaaaaaaccaagggctccacgccccaaagccacggaagcaaaa
agtacagagggtgacgctcctaaaaaagcgcctcaaaaaagagagcccagaagcaaaaag
gacgactccaaaccacaaggaaaacctcaaaaaaaggacaacaagccgcaggacaacaag
tcacaagacaataagtcccacagcagctcccaaaagaatcaaaacactaggaggagcaac
caacataacaagccccaccacgacaaaaagaacagcaattttgacaaggacttgagaaac
aggtacaaagaacctgaatatgagttcgatagcattattgagagtgaaggtgtgttggat
attatgcaggatggctacggattcctaaggtcttccgattacaactatctttcttctccc
gacgatatttacgtttcccaatcgcaaatacgattgttcggacttaagtccggggatacg
atcttgggcaatattcgccccccaaaagaaggtgaaaaatatttcccgttgatcaaagtg
aacaaaataaatggattggacccacaagtggttcgagacagggtagcttttgaacacctt
accccgttgttccctaaggaaaagttcaagttagcggaaaaacaaagtaccatttccaca
cgtatcatggatttgttctcccctattgggaaaggacaaagaggaatgattgtttcccag
cccaaaacgggtaagaccatgttgctgaaggatattgccaacgccattgcagctaaccac
cccgaagtgtatcaaatcatcttattgatcgatgaacgccccgaagaggttaccgacatg
cagcgtaacgtgcgtggcgaagtagttgcttctacttttgacaaagaagccaccgagcac
gtaagagttgccaatattgtattggaaaaagcaaaacgattagtagaatgtggtcatgac
gtagtgatccttttggattccattacacgtttggcccgtgcctataataccgtacaacca
gcatctggtaaagtattgagtggtggtgtggacgcgaatgcactacataaaccaaaacgt
ttctttggtgcggcccgtaacattgaaaatggtggatcattgtccattattgcaacggcc
ttgaccgaaaccggttccaaaatggacgaggttatctttgaggaattcaagggtacaggt
aacatggagcttcaattggacagaagaatctccaacagaaggattttccctgccatcgac
cttatttcttcctctacacgaagagacgatctgttgttggacgaaaacaccattcaacgt
atgtggatcatgcgcaaatatcttgcagatatgaaccctattgaagctatggagtttatg
gaacaacgcataaagcaaaccaagaacaacgaggagtttttactcaccatgaacgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (127)   
   KEGG ORTHOLOGY (1)   
   RefGene (124)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (145)   

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