KEGG   Mycobacterium sp. JS623: Mycsm_06105
Entry
Mycsm_06105       CDS       T02423                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
msa  Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:msa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:msa02048]
    Mycsm_06105
Enzymes [BR:msa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Mycsm_06105
Prokaryotic defense system [BR:msa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Mycsm_06105
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1RH-like_C DEAD
Other DBs
NCBI-ProteinID: AGB26264
UniProt: L0J4P7
Position
6069124..6072213
AA seq 1029 aa
MSTVGQLERATQRRAVRLFQDHLGYGHAGNWAERVGNSNIEETILRENLLARDYDDVVIT
RAINELHKAAGVGGARSLYEANRAVYDQLRYGVKVKRGVAEQYETIRLIDWGNPNANHFV
IAEEVSIKGQHTKRPDVVLYVNGLALGVIEFKRSKVSVSEGIRQNIGNQQQHFIRPFFST
VQLLFAANDVEGLRYGVIEAPEKYWLEWKEPSDVAQPLDRALLQMCSKERFLELIHDFMV
FDSGVKKIARHNQYFGVKAAQKRVTKREGGIIWHTQGSGKSLTMVWLAKWIREHQDQARV
LIITDRTELDVQIEGVFGGVNEEIYRTMSGADLIGTIDKHDPWLICSLVHKFRSGDDDAE
RDEAGGDFIAELNAKLPKNFAAKGNLFVFVDEAHRTQSGAMHRAMKALLPGAMFIGFTGT
PLLKADAATSIETFGSFIHTYKFDEAVRDGVVLDLRYEARDIDQELKGGAKVDEWFETKT
KGLTDLSKARLKKRWGTMQKVVSAKSRAEMIVQDVLLDFAREPRLVSGRGNAMLVGDSIY
QACKFYEMFVAAGFTGKCAIVTSYVPNPGDVAKEDSGEGATEKLRQYEIYRQMLADYFDE
PADKAVLRIEEFEKDVKRRFIEEPGQMRLLIVVDKLLTGFDAPSATYLYVDKKMRDHGLF
QAICRVNRLDGDDKTYGYIVDYRDLFKSLHAAYTDYTTEAFEGYEKKDIEGLLEDRIGKA
REDLDDALEKIRALVEPVKAPKGTLEYQHYFVSDVPGDAGQIKANESKRIAFYKAVASLA
RAYAGIANDMDRAGYSLAEADAIKEELARYVAARDEVELGAGENIDLKQFEAGMRALLDT
YIQADPVENVATFNKGLVELIAEHGKNALGTMPPGIRNNSQAAAETIVNNVRKTIIDEHA
MNPKYYDKMSELLDALIEQRRQDAIDYKQYLAEVMALAAKIGTKESDTKYPGWVTTVAQR
ALVDFGWSDGVNVQVVYDTIQGEKSHDWTGNKFKQRELSHALRKVLPEDVDSDRLSALIS
LLKEHDEFR
NT seq 3090 nt   +upstreamnt  +downstreamnt
gtgagtaccgtcggccagctagagcgcgcgacacagcgccgggctgtcaggctgtttcag
gatcatctgggctacgggcacgccggcaactgggcagagcgcgttggtaactcgaacatc
gaggagacaatccttcgcgagaacctgctggcgcgcgactacgacgacgtcgttataacg
agggcgatcaacgagctgcataaggccgctggcgttggtggtgcacgcagcctgtacgag
gccaaccgtgccgtctacgatcagctgcgctatggcgtgaaggtgaagcgtggggtggcc
gagcagtacgagacgattcggctgatcgactggggcaacccgaacgcgaatcacttcgtg
atcgccgaagaggtgtcgatcaagggccagcacaccaagcgccccgatgttgtgctgtat
gtgaatggcttggcactgggtgtgatcgagttcaagcgctcgaaggtcagtgtgtccgag
gggatacggcagaacatcggcaaccagcagcagcatttcatcaggccgttcttctccacc
gttcagttgctttttgccgccaacgacgtggagggtctgcggtacggggtaatcgaggcg
ccggagaagtattggctggagtggaaggagccgtctgatgtcgcgcagccgcttgaccgt
gcgctgctgcaaatgtgttccaaggagcgctttctggagttgatccacgacttcatggtg
ttcgactcgggggttaagaagatcgcgcggcacaaccagtatttcggtgtgaaggccgcg
cagaaacgggtcaccaaacgcgagggtggcatcatctggcacacccagggctcgggcaag
agcttgacaatggtgtggttggccaagtggattcgtgagcaccaggaccaggcgcgggtg
ttgatcatcactgatcgcaccgaactcgatgtgcagatcgagggcgtctttggcggcgtc
aacgaagagatctaccggaccatgagcggcgctgatttgatcggcacgatcgacaaacac
gatccgtggctgatctgctcactggtgcacaagttccgtagcggcgatgacgacgcggag
cgtgacgaggctggcggcgacttcatcgccgaactgaatgcgaagcttcccaagaacttt
gcggctaagggcaatcttttcgtctttgtcgacgaggcgcaccgcacccagtcgggtgcg
atgcaccgcgccatgaaggcgctgctgccgggggcgatgttcatcggcttcaccggcaca
ccactgctcaaggctgacgcggcgaccagcatcgaaaccttcggtagcttcatccacacc
tacaagttcgacgaggccgtgcgcgacggtgtggtgctcgatctgcgctacgaagcgcgc
gacatcgaccaggagctcaagggtggcgccaaggtcgacgaatggttcgagaccaagacg
aagggactgaccgacctcagcaaggcccggctcaagaagcggtggggcaccatgcagaag
gtggtgtctgccaagtcccgcgccgagatgatcgtgcaggacgtactgctggactttgcg
cgcgaaccacgtctggtaagcgggcgcggtaacgccatgctcgtcggcgacagcatctac
caggcgtgcaagttctacgagatgttcgtggctgccggcttcacgggcaagtgcgccatc
gtcaccagctacgtacccaatcctggcgacgtcgccaaggaggattccggcgagggcgcg
accgagaagttgcgccagtatgagatttaccgtcagatgctggccgactacttcgacgaa
cccgccgacaaggccgtgctgcggatcgaggagtttgagaaggacgtcaagcgccgtttc
atcgaagagcccggccaaatgcggttgctgatcgtcgtggacaaactgctgaccggcttc
gacgccccgagcgcgacgtacctctacgtcgacaagaagatgcgcgatcacggcctgttt
caagccatttgccgggtgaaccggctcgacggcgacgacaagacctacgggtacatcgtc
gactaccgcgatctgttcaagtcactgcacgcggcctacaccgactacaccaccgaagca
ttcgaagggtatgagaagaaggacatcgaggggctcctcgaagaccgcatcggaaaggcc
cgcgaagacctcgacgacgcgctggagaagatccgcgccttggtcgagccggtcaaggcg
cccaagggcacgttggaataccagcactacttcgtgtcggacgtccccggtgacgccggc
cagatcaaggccaacgaatcaaagcgtatcgcgttctacaaggcagttgcgtctctcgcc
cgcgcctacgccgggatcgccaacgacatggaccgcgccggctactcacttgcggaggcc
gacgccatcaaggaggaattggctcgctacgttgccgcgcgcgacgaagtcgaactcggc
gccggcgaaaacatcgacctgaagcagttcgaggctggcatgcgcgcgctgctcgacacc
tacattcaggccgatcccgtcgagaacgtcgccaccttcaacaagggcctggtggagctg
atcgccgaacacggtaaaaatgccctcggcacaatgccgccaggaatccgcaacaattcg
caggccgccgccgagacaatcgtcaacaacgtgcgcaagacgatcatcgacgagcacgcg
atgaaccccaagtactacgacaagatgagcgagctactcgacgctctcatcgaacaacgc
cgccaggacgcaatcgactacaagcagtatctggctgaggtgatggcgctggccgccaaa
atcggcaccaaggagtcggataccaaatacccgggctgggtcaccaccgtcgcccagcgc
gcactggttgacttcggctggtccgacggcgtgaatgtccaggttgtctacgacacgatt
caaggcgagaagagccacgactggaccggcaacaagttcaagcaacgcgaactgtctcac
gcgctgcgcaaggtgctgcccgaagacgtcgactccgaccggctttcggcgctcatcagc
ttgctcaaggagcacgatgagtttcgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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