KEGG   Methylocella silvestris: Msil_2583
Entry
Msil_2583         CDS       T00802                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
msl  Methylocella silvestris
Pathway
msl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Msil_2583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msl03400]
    Msil_2583
Enzymes [BR:msl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Msil_2583
DNA repair and recombination proteins [BR:msl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Msil_2583
SSDB
Motif
Pfam: DEAD PriA_C PriA_3primeBD ResIII PriA_CRR Helicase_C zf_Rg AAA_30 zinc-ribbons_6 zf-CHY
Other DBs
NCBI-ProteinID: ACK51506
UniProt: B8EQ16
Position
2818973..2821207
AA seq 744 aa
MPAAESVQSVVDVLFPVAVDTAYSYVAPAAMGLVPGAFVEAPLGPRRAIGVVFAQRPAPP
GASNLRAVAARLDISPLGDRLRDFIDWVARWGMSPRGMVLRMAIRAPFHAAPEPKRVGLR
LTGAAPARLTPARERTLAAAQAGGLMTKAALAKAAGVSASVIDGLIRQGVFTLETLAPEP
AAPVGDPDFRQPLLSQDQAAAAAELAKAVLAQSFSVTLLEGVTGSGKTETYFEAIAAALR
AGRQTLVLLPEIALTSQFVDRFGARFGAAPVEWHSGIGAARRARIWSAVASGEAKIIIGA
RSALFLPFQSLGLVIVDEEHDGAYKQEDGVVYHARDMAVVRGRIEQCAVILASATPSIET
RVNADQGRYRRLVLKDRFGGRAMPKIEAVDMRLKPPPRGKWISPALIAALADNLGKGQQS
LLFLNRRGYAPLTLCRSCGHRFQCPNCAAWLVDHRFRKALICHHCGHMERRPELCPNCEA
VESLMACGPGVERLEEEAAELFPDARLMILSSDLAGGAERLRAEFEAVARGACDIVIGTQ
LVAKGHNFPGLTLVGVIDADIGLTSGDPRAAERTFQLLQQVTGRAGRFETPGRALVQSFQ
PEHPVMRAILSGDSEKFYAEEIEQRRRAGLPPFGRLAALIVSGNDAASAEAFARALARAA
HDLPRSDGWTLAAAGGLPTEGELSLLGPAEAPIAILRGRHRFRLLIRAPRSSDLQGFLNA
LLAAGPPQRGGVNAAIDIDPQSFL
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgccggctgccgaaagcgtgcaaagcgtcgtcgacgtgctgtttccggtcgccgtcgac
accgcctattcctatgtcgcccccgccgcgatgggcctcgtccccggcgctttcgtcgaa
gcgccgctcggaccgcggcgggcgatcggcgtcgttttcgcgcagcgcccggccccgccc
ggcgcctccaatctgcgcgccgtcgccgcccggctcgacatctccccgcttggcgaccgc
ctgcgcgactttatcgactgggtcgcgcgctggggcatgagcccgcgcggcatggtgttg
cggatggcgatccgcgccccgtttcacgccgcgcccgagccgaagcgggtcggcctgcgc
ctgaccggcgccgcgccggcccgcctcactccggcgcgggagcggacgctggccgcggcg
caagcgggcggcctgatgacgaaggcggcgctggccaaagcggccggggtttcggcctcg
gtcatcgacgggctcatccgtcagggcgtcttcacgctcgaaaccttggcgcctgagcct
gccgcgccggtcggcgatcccgatttccgccagccgctgctttcgcaagatcaggccgcc
gccgccgccgagctggcgaaagccgtcttggcgcagagcttttcggtgacgctgctcgaa
ggcgtcacaggctcgggcaagaccgaaacctatttcgaggcgatcgccgccgctctccgc
gccgggcgccagacgctggtgctgctgccggaaatcgccctgaccagccagttcgtcgac
cgttttggcgcgcgtttcggagccgcgccggtcgagtggcattcagggataggcgccgcg
cggcgtgcaaggatctggagcgctgtcgcttcaggcgaggcgaaaatcatcatcggcgcg
cgctcggcgttgtttttgccgtttcaatcgctggggctcgtcatcgtcgacgaggagcat
gacggcgcctacaagcaggaggacggcgtcgtctatcacgcccgcgacatggcggtggtg
cgcggccggatcgagcaatgcgcagtgatcctcgccagcgcgacgccctccatcgagacg
cgggtcaacgccgatcagggccgctaccggcgcctggtgctgaaagaccgatttggcggc
cgcgccatgccgaagatcgaggcggtcgatatgcggctcaagccgccgccgcgcggcaaa
tggatttcgcctgcgctgatcgccgcactcgccgacaatctcggcaagggccagcaatcg
ctgctgttcttaaaccggcgcggctatgcgccgctgacgctctgccgtagctgcggccat
cggttccaatgcccgaattgcgcggcgtggctcgtcgatcatcgctttcgcaaggcgctg
atctgccaccattgcggccatatggagcgccgtccggagctttgccccaattgcgaggcg
gttgaatccctgatggcttgtgggccgggcgtcgagcggctggaggaggaggccgccgag
ctgtttcccgacgcgcggctcatgatcctgtcgtccgatctggcgggaggcgcggagcgg
ctcagggccgaattcgaagcggtggcgcgcggcgcctgcgacatcgtgatcggcacgcag
ctggtcgccaagggccataattttccggggctgacgctggtcggcgtcatcgacgccgat
atcggcctgacctcgggcgatccgcgcgcggcggagcgcacctttcaattgctgcagcag
gtcaccggccgcgccggccggttcgagacgccggggcgcgccctggtgcaaagttttcaa
cccgagcatccggtgatgcgggcgatcctctccggcgacagcgaaaaattttacgccgag
gaaatcgaacagcgccggcgcgccggtctgccgccattcggccggctggcggccttgatc
gtctcgggcaatgatgcggcgtcggccgaggctttcgctcgcgctttggcgcgggcggcg
catgatctgccgcgctcggatggatggacgctcgctgcggccggagggttgccgaccgag
ggcgaactttccctgctcggaccggcggaggcgcccatcgcgatcctgcgcgggcgccac
cgcttccgcctgctcatccgcgcgccgcgctcctccgatttgcagggatttttgaacgct
ttgcttgcagcgggaccgccgcaacgcggtggggtgaacgcggcgatcgatatagacccg
caaagctttttgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

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