KEGG   Methanosarcina siciliae T4/M: MSSIT_0038
Entry
MSSIT_0038        CDS       T03865                                 
Name
(GenBank) Endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
msw  Methanosarcina siciliae T4/M
Pathway
msw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MSSIT_0038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msw03400]
    MSSIT_0038
Enzymes [BR:msw01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MSSIT_0038
DNA repair and recombination proteins [BR:msw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MSSIT_0038
 Prokaryotic type
     MSSIT_0038
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 HHH_2 EndIII_4Fe-2S RecR_HhH DUF2400 HHH_8
Other DBs
NCBI-ProteinID: AKB26757
UniProt: A0A0E3P0D0
Position
55851..56465
AA seq 204 aa
MDLDELMRRLFELYPEGYTDGSRDPFFVLISTVMSHRTRDDVTYPAARKLFERFSTPEEM
VEADVEEIEALIKDVGFYRVKAGRIKEISGILLEEYDGRVPDEMEALLKLPGVGRKTANC
VLAHAFFKDALAVDTHVHRISNRLGLVETKTPEETELELIKIFPQKYWKHINLLLVKLGQ
NICRPISPKCELCVLKDMCPKILL
NT seq 615 nt   +upstreamnt  +downstreamnt
atggaccttgatgaactcatgcggagacttttcgaactttaccctgagggctatactgat
ggctcaagagatcccttttttgtgttgatttccactgtcatgtcccacaggacccgggac
gatgtaacctatcctgcagcaaggaagctttttgagaggttctcaactcctgaggaaatg
gtcgaggctgatgttgaagaaattgaagcgctcataaaagatgtgggtttttacagggtc
aaagccgggaggataaaagagatttccgggattctgcttgaggaatacgatggccgggtt
ccggatgagatggaagccctcctcaagctgccgggagttggccgaaagaccgccaactgc
gtactcgcccatgccttctttaaagatgcccttgcagttgacacgcacgttcacaggatt
tccaacaggctcgggctggttgaaactaaaactcccgaagagacggagcttgagttaata
aaaatttttccgcagaaatactggaaacatataaatctcttgcttgtaaaactagggcag
aatatctgccggccgatttccccaaaatgcgaactctgcgtcctgaaagatatgtgtccg
aaaattctcctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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