KEGG   Marinobacter similis: AU14_07865
Entry
AU14_07865        CDS       T03594                                 
Name
(GenBank) helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
msx  Marinobacter similis
Pathway
msx03420  Nucleotide excision repair
msx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AU14_07865
   03430 Mismatch repair
    AU14_07865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msx03400]
    AU14_07865
Enzymes [BR:msx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AU14_07865
DNA repair and recombination proteins [BR:msx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AU14_07865
   MMR (mismatch excision repair)
    Other MMR factors
     AU14_07865
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_22 ResIII AAA_12 NACHT
Other DBs
NCBI-ProteinID: AHI28547
UniProt: W5YH56
Position
complement(1640010..1642328)
AA seq 772 aa
MRDGYPLYQLASTIRPMPTKPQHAALDLPDFLTDEQRAIITAGYEHSVITAVAGSGKTST
LAWRIRYLLQQGHDPDRMLVLMFNRSARVDFGRKLQEVCHQSGLALPEIRTYHAMGLRLY
KRFVREGYLPGFSDKILTEQEISFQAWQLTRRLAPEDLADEIRRNKKDFVETATGFIDLV
KTTLSPAEIVFEELGYADKHRYLIDLFHSFEQWRKSQSRISYADMLYEPVMAIHQNPPLQ
RLVGNKMDLILVDEYQDTNEIQHLLLRYVAGDRARVTVVGDPDQTIYEFRGAKPEFILKR
FSDEFESPLEQTLSYTFRYGHRVALLANHLICHNTGRKDVLCHSHPSTPATEVELHRVDS
DSDAVVRILQQTPEANLSDTAILFRVWSQSVPIELKLLARQIPYRIDAGKGALFSREVQA
IISVLMVVTGRLSNLPDTDRLEVARQLLRFPHVGLKEPELEQLARFLSGFANDWHERLLA
MDYDALSPMAGRKLRKLGEVLAQLRDYKGPVAGLISGYAEHTDLYEGIRSLALTHESAEE
RIDTVHGFREYLKSLDVDANGALDHLKTLKQQAGENQQGGVLLSTIHRTKGLEWPRVIIP
GLQEKYLPYSPRAEDDARAILESERRLLYVAMTRSRQQLHLLSRPVSAQPHLEGDQGPSR
FVEEFCFDLAHELGRLLDEGNHKTDSAIELSAPITPVSLRYAEREGISLNGSEVTQTDST
SVLWHRQRLSHAIFGAGSVVSEDESAFEVRFDNGDTLNFSKKSAHLYFSPLA
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgcgggacgggtacccgctctaccagttggccagtacaatacgccctatgccaaccaaa
ccccaacacgccgccctcgatctgccagattttctcaccgacgagcaacgggcgatcatc
accgccggttacgagcactccgttatcaccgccgtagctggtagcggcaagacctccact
ctcgcctggcgcattcgctacctgctgcaacaaggccacgatccggatcgcatgctggta
ctgatgttcaaccgcagcgcgcgggtggatttcggacgcaaactccaggaggtctgccac
cagagcgggctggcactgccggagatccgcacctatcacgccatggggttacggctgtac
aaacgattcgtccgcgagggctacctgccgggcttttcagacaagatcctgaccgaacag
gaaattagcttccaggcctggcaactgacccgccgcctggcgcccgaggacctggccgac
gagattcgccgcaacaagaaggatttcgtggaaaccgccaccggcttcattgatctggtg
aaaacgaccttgtcgccagcggaaatcgtgttcgaagagctggggtacgccgacaagcac
cgatacctgatcgacctgttccacagcttcgaacaatggcgcaaaagccagagccgcatc
agctacgccgacatgctctacgagccggtgatggcaattcaccagaatccgccacttcag
cggttggtgggtaacaagatggaccttattctggtcgacgagtatcaggacaccaacgaa
atccagcatctgctgctgcgctatgtggccggtgaccgggcccgggtcaccgtggttggc
gatcccgaccagaccatctacgaattccggggcgccaagccggaattcatcctgaaacgg
ttcagcgacgaatttgagagcccgctggagcagacgctcagctacacctttcgctacggt
caccgagtagccctgctggccaatcatctgatctgccacaacaccggtcgcaaagatgtg
ctgtgccactctcacccctcaacacccgccactgaagtggagctgcaccgggtcgacagt
gacagcgacgccgttgtccggattctgcagcagacaccagaggcaaacctcagcgacacc
gccattctgttccgggtctggagccagagcgtgccgatcgagctgaaactgctggcccgg
cagattccttaccgcatcgacgccggcaagggcgccctgttcagccgggaggttcaggcc
atcatctccgtgctgatggtagtgaccggccgattgagcaacctgcctgacaccgaccgg
ctcgaggtagcacgacagttactgcgtttcccgcacgtgggcctgaaagaaccggaactg
gaacagctggcccgtttcctgtccggcttcgccaacgactggcacgaacgcctgctagcc
atggactacgacgctctgtcacccatggccggtcgcaagcttcgaaaactcggcgaggta
ctggcccagctgcgcgattacaagggcccggtggccggactgatcagcgggtatgccgag
cacaccgacctgtacgaaggcattcgcagcctggcgttgactcacgagagcgccgaggaa
cgcatcgacaccgtgcatggtttccgcgagtacctgaaaagtctggatgtggatgccaat
ggtgccctggatcatctgaaaacattgaaacagcaggcgggcgagaaccagcagggcggt
gttttgctctccaccattcaccgcaccaaggggctggagtggccacgggtgatcatcccc
ggcctgcaggaaaagtacctgccttacagtccaagggccgaagacgacgcccgggcgatc
ctcgaaagcgaacggcgcctgctgtacgtcgccatgacccgttcccgccagcagttacac
ctgcttagccgaccggtgagtgcccaaccccacctggagggcgatcagggcccgagccgg
tttgtcgaggaattctgcttcgatctggcccacgaactcgggcgcctgcttgatgaaggc
aaccacaaaacggacagcgccatcgaactgtcggctccgatcacgcccgtgagtctgcgt
tacgccgaacgggagggcatctccctgaacggctctgaagtaacccagaccgactccaca
agcgtgctctggcaccgacaacgcctgagccacgccatcttcggtgccggcagcgtggtc
agcgaagacgaaagcgccttcgaggtacgcttcgacaacggcgacaccctgaacttcagc
aaaaagagtgctcacctttatttttcgcctttggcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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