KEGG T01690: TBSG

Mycobacterium tuberculosis KZN 4207: TBSG_01200

Entry

TBSG_01200        CDS       T01690

Name

(GenBank) bifunctional polyribonucleotide nucleotidyltransferase gpsI

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

mtk Mycobacterium tuberculosis KZN 4207

Pathway

mtk03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:mtk00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TBSG_01200
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtk03019]
    TBSG_01200
   03016 Transfer RNA biogenesis [BR:mtk03016]
    TBSG_01200
Enzymes [BR:mtk01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     TBSG_01200
Messenger RNA biogenesis [BR:mtk03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     TBSG_01200
Transfer RNA biogenesis [BR:mtk03016]
Prokaryotic type
  tRNA degradation factors
   TBSG_01200

SSDB

Motif

Pfam:

RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 KhpA-B_KH KH_5

Other DBs

NCBI-ProteinID:

AEB03329

Position

1321004..1323262

AA seq 752 aa
MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK
NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR
NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD
QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI
AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ
RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA
EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE
TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA
LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG
TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI
KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP
QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE
IADIDKRGKISLILVADEDSTAAATDAATVTS

NT seq 2259 nt +upstreamnt +downstreamnt
atgtctgccgctgaaattgacgaaggcgtgttcgagacgaccgccaccatcgacaacggg
agctttggcacccggaccatccgcttcgagaccggccgattggccttgcaggccgccggc
gcggtggtcgcctacctcgacgacgacaacatgctgctgtcggcgaccaccgccagcaag
aaccccaaagaacacttcgacttcttccccctcacggtcgacgtcgaggagcgcatgtat
gcggccggccgcatccccggttcgttcttccgtcgcgagggccgaccctccaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcgcccgtcgtttgtcgacgggctgcgc
aacgagatccaaatcgtggtgacgattctcagcctggatccgggcgatctctacgacgta
ttggcgatcaacgcggcgtcggcgtccacccagctgggcggtctgccgttctccgggccc
atcggcggtgtgcgggtggcgctcatcgacggcacctgggtcggcttccccaccgtcgac
cagatcgagcgcgccgtgttcgacatggtcgtggccggccggatcgtcgagggtgatgtt
gccatcatgatggtcgaagccgaggccaccgaaaacgtcgtcgagctcgtcgaaggtggt
gcccaagcgccgacggaaagcgtggtggccgcgggcctggaggcggccaagccgtttatc
gccgcgctgtgcaccgcgcagcaggagcttgccgatgccgctggaaagtcgggcaaaccg
accgtcgacttcccggtgttccctgactacggcgaagacgtgtactactcggtgtcctcg
gtggccaccgacgagttggccgccgcgttgaccatcggcggtaaagccgagcgcgaccag
cgcatcgacgaaatcaagacccaggttgtgcagcggctcgccgacacctacgagggtcgc
gaaaaggaggtcggcgccgcgttgcgtgccctgaccaaaaagctggttcggcagcgcatc
ctcaccgaccatttccgtatcgacggccgcggcatcaccgacattcgcgcattgtcggcc
gaggtggccgtggttccgcgcgcgcacggcagcgcgctgttcgaacgcggcgaaacccag
atcctgggtgtgaccacactcgacatgatcaagatggcccagcagatcgactcgttgggg
ccggagacatcgaagcggtacatgcaccactacaacttcccgccgttctccaccggcgag
accggtcgggtcggttcgcccaagcggcgtgagatcgggcacggcgcactggccgagcgg
gccctggtgccggtgttgccgagcgtcgaggaattcccgtatgccattcgccaggtgtcg
gaggctctgggctccaacgggtcgacctcgatggggtcggtgtgcgcgtcgacgctggcg
ctgctcaacgccggggtgccgctcaaggcgccggtggccggcatcgcgatgggcctggtc
tccgacgacattcaagtagaaggggcggtcgacggcgttgtggagcgtcgcttcgtcacc
ctcaccgacatcctcggcgccgaagacgcgttcggtgacatggacttcaaggtcgccggg
accaaggacttcgtcaccgcgctgcagctggacaccaagctcgacgggatcccttcgcag
gtgcttgccggagcactcgagcaggccaaggacgcccgcctcacgatcttggaggtgatg
gctgaggccatcgatagacccgacgaaatgagtccctacgccccgcgggtgaccaccatc
aaggttccggtggacaagatcggggaggtcatcggacccaagggcaaggtcatcaacgcc
atcaccgaggagaccggcgcgcagatctccatcgaagacgacggcaccgtgttcgtcggc
gccaccgacgggccatcggcacaggccgcgatcgacaagatcaacgccatcgccaacccg
cagctgccgacggtgggcgaacggttcctcggaaccgtggtcaagaccaccgatttcggt
gcctttgtatcgttgctgcctggccgcgacggtctggtgcacatttccaaactcggcaag
ggcaagcgcatcgcgaaggtcgaggacgttgtcaatgtcggtgacaagctgcgggtggag
atcgccgacatcgacaaacggggcaagatctccctgatcctggtcgccgacgaggacagc
accgccgccgctaccgatgccgcgacggtcaccagctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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