KEGG   Meriones unguiculatus (Mongolian gerbil): 110548596
Entry
110548596         CDS       T05884                                 
Symbol
Chd4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
  KO
K11643  chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
mun  Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03082  ATP-dependent chromatin remodeling
mun05165  Human papillomavirus infection
mun05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mun00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110548596 (Chd4)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    110548596 (Chd4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    110548596 (Chd4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mun03036]
    110548596 (Chd4)
Chromosome and associated proteins [BR:mun03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110548596 (Chd4)
  Chromatin remodeling factors
   NuRD complex
    110548596 (Chd4)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 PHD Chromo ResIII HDA2-3 PHD_2 DEAD zf-PHD-like
Other DBs
NCBI-GeneID: 110548596
NCBI-ProteinID: XP_021492686
Position
5:114203410..114238031
AA seq 1946 aa
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPHPENEEDPEEDLSEAETPKLKKKKKPKKP
RDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKL
GPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLEDWGMEDIDHMFSEEDYRTLTNYKA
FSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESM
VTATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGG
FGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVT
AVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ
WEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPL
PEIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPE
RQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKN
KDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVE
IQDYDLFKQGYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLD
ATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLV
SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE
ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL
TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKA
DVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCN
HPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLD
LLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVR
PGLGSKTGSMSKQELDDILKFGTEELFKDESTDGGGDNKEGEDSSVIHYDDKAIERLLDR
NQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRH
HYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRGVCGRPRPPPTGRSTRAVGPAHLPSLP
PDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIE
VLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGA
DGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEVEENKKMSQ
PGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGVKIEENSLKEEESTEGEKEVKSAVPEVTV
ESAQTPAPAPAPASAPEDEKAPAESSEGEEKVEKAEVKERTEEPMETETKGAAEVEKVEE
KSAVDLTPIVVEDKEEKKEEEEKKEVMLQNGETPKDLSDEKQKKNIKQRFMFNIADGGFT
ELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFK
GEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVE
CLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQ
MSERNILSRLANRAPEPPPQQVAQQQ
NT seq 5841 nt   +upstreamnt  +downstreamnt
atggcgtcgggcctgggctccccgtccccctgctcagcgggcagtgaggaggaggatatg
gatgcacttctgaacaacagcctgcccccaccccatccagaaaatgaagaagacccagaa
gaggatttatcagaagcagagactccaaagcttaagaagaagaaaaagcctaagaagcct
cgagaccctaaaatccctaagagcaagcgccaaaaaaaggagcgtttactcttatgccgg
cagctgggggacagctctggggaggggccagagtttgtggaggaggaggaagaggtggct
ctgcgctcagacagcgagggcagcgactacactcctggcaagaagaagaaaaagaagctt
ggacctaagaaagagaagaagagcaaatccaagcggaaggaggaggaagaagaggaggat
gatgatgatgattcaaaggaacctaaatcatctgcccagcttttggaagactggggcatg
gaagacattgaccacatgttctcagaggaagattaccgtaccctcaccaactacaaggcc
ttcagccagtttgttcgaccgctaattgctgctaaaaaccccaagattgctgtctccaag
atgatgatggttttgggtgcgaagtggagggagttcagtaccaacaaccccttcaagggc
agctctggagcttctgtggccgctgcggctgcagcagccgtggctgtggtggagagcatg
gtgacggccactgaagttgcacctcccccaccccctgtggaggtgcctatacgcaaggcc
aagaccaaggagggcaaaggtcctaatgctcggaggaagcccaaaggcagcccccgagtg
cctgatgccaagaaacccaaacccaagaaagtagctcctttgaaaatcaagctgggaggt
ttcggctccaagcgtaagagatcctcgagtgaggatgatgatttagatgtggaatctgac
ttcgatgatgccagtatcaatagctattctgtttcggatggttctaccagccgcagcagt
cggagccgcaagaaactccggactactaaaaagaaaaagaaaggcgaggaggaggtgact
gctgtggatggttatgagacagaccaccaggactattgcgaggtgtgccagcaaggcggt
gagatcatcctgtgcgacacctgcccccgagcctaccacatggtgtgcctggacccagac
atggagaaggcccccgagggcaagtggagctgcccacactgtgagaaggagggcatccag
tgggaagcaaaagaggacaattctgagggggaggagattttggaagaggttgggggagac
ccagaagaggaagatgaccaccatatggaattctgtcgagtctgcaaggacggtggagag
ctgctgtgctgtgacacctgcccttcatcctaccatatccactgcctgaaccccccactg
ccagagatcccaaatggcgagtggctctgtccccgctgtacttgtccagctcttaagggc
aaagtgcagaagatcctgatttggaagtggggccagccaccatctcccacaccagtgcct
cggcctccagatgctgatcctaataccccctctcccaaacccttggaggggcggccagag
aggcagttctttgtgaaatggcaaggcatgtcttactggcactgctcctgggtgtcagaa
ctgcagctggagctacactgtcaggtgatgttcagaaactatcagcggaagaatgatatg
gatgagccaccttctggggactttggtggagatgaagagaagagcagaaagcgaaagaac
aaagaccctaagtttgcagagatggaagaacgcttctatcgctatggaataaaaccagag
tggatgatgatccaccgaatcctcaaccacagtgtggacaagaagggccacgttcactac
ttaatcaagtggagagacttgccctatgaccaggcgtcctgggagagtgaggacgtggag
atacaggactacgacctgttcaagcagggctactggaaccacagggagttaatgaggggt
gaggaagggcgaccaggcaagaagcttaagaaggtcaagctgcggaaactggaaaggcct
ccggagactccaactgttgatccgacagtgaagtatgagcgacagccagagtacctggat
gccacaggtggaaccctgcacccctaccaaatggaaggcttaaactggctgcgcttctcc
tgggctcagggtaccgacaccatcttggctgatgagatgggcctcgggaaaactgtgcag
acagcggtctttctctattccctctacaaggagggtcattccaaaggccccttcttagtg
agtgctcctctttctaccatcatcaactgggagcgagagtttgagatgtgggctcctgac
atgtatgtggtaacctatgtgggtgacaaggacagccgtgctatcatccgggaaaatgag
ttctcctttgaagacaatgccattcgaggtggcaagaaggcctcccgaatgaagaaagaa
gcatctgtgaaatttcatgtcctgctgacatcctatgaactgataaccattgatatggcc
atcttgggttctattgattgggcctgcctcattgtggatgaagcccatcgactgaagaac
aatcagtctaagttctttcgagttttgaatggttactcactccagcacaagctgttgcta
accgggactccattacaaaacaatctagaggaattgtttcatctgctcaattttcttacc
cctgagaggttccacaatttggaaggcttcttggaggagtttgctgacattgccaaagag
gaccagattaaaaaactacatgacatgctgggacctcacatgttgcgtcggctcaaagct
gatgtattcaagaatatgccatccaagacagaactgattgtgcgtgtggagctgagccct
atgcagaagaagtactacaagtatattctcactcggaatttcgaagctcttaatgctcga
ggcggtggcaaccaggtctctctgctgaacgtggtgatggaccttaagaagtgctgcaac
cacccttacctcttccctgtggcagccatggaagcccctaagatgcctaatggcatgtat
gatggcagtgctctaatcagagcatctgggaaattgttgctgctacagaagatgcttaag
aaccttaaagagggagggcatcgcgtactcatcttttcccagatgaccaagatgttggac
ttgctagaggactttttagaacatgaaggttataagtatgaacgtattgatggtggaatc
actgggaacatgcgtcaggaggccattgatcgtttcaatgcaccgggtgctcaacagttt
tgcttcttgctttccactcgagctgggggcctggggatcaatctggccactgctgacaca
gttattatatatgactctgactggaacccccataatgacatccaggcctttagcagagcc
caccgtattgggcaaaataagaaggtaatgatctaccggtttgtgacccgtgcgtcagtg
gaggagcgcatcactcaggtggcaaagaagaagatgatgctgacacatttagtggtgcgg
cctgggctgggctccaagactggctcaatgtccaagcaggagcttgatgacatcctcaaa
ttcggcactgaggaactgttcaaggatgaatccacggatggaggaggagacaacaaagag
ggagaagatagcagtgttatccattatgatgataaggccattgaacgactgctggatcga
aaccaggatgagactgaagacacagagttgcagggcatgaatgaatatttgagctcattc
aaagtggcccagtatgtagtacgggaagaagaaatgggggaggaagaggaggtagaacgg
gaaatcataaaacaggaagaaagtgtggatcctgactactgggagaaattgctgcggcac
cattatgagcagcagcaagaagatctagcccgaaatctgggcaaaggaaaaagaatccgt
aaacaggtcaactacaatgatggctcacaggaggaccgaggtgtgtgtggccggccccgc
cccccacccacgggccgttccactagagcagtgggccccgctcatctgccctctctccct
ccagattggcaggacgaccagtccgacaaccagtccgattactcagtggcctcagaggaa
ggtgatgaagactttgatgaaagatcagaagctccccgcaggcccagtcgcaagggcctg
cggaatgataaagataagccattacctcctctgctggcccgcgttggggggaatattgaa
gtgcttggttttaatgctcgtcagcgaaaagcatttcttaatgcaattatgcgatatggc
atgccacctcaggatgcttttaccactcagtggcttgtgagagatcttcgaggcaagtca
gagaaagaatttaaggcttatgtctcactcttcatgaggcatttatgtgagcctggggca
gatggggctgagacttttgctgatggcgtccctcgagaaggcctgtctcgtcaacatgtt
cttactagaattggtgtcatgtccctgattcgaaagaaggttcaggagtttgaacatgtt
aatgggcgctggagcatgcccgaactggctgaagtagaggaaaacaagaaaatgtctcag
ccagggtcaccctctccaaagactcctacaccgtccacaccaggggacacacaacccaat
actcctgcccctgtgccacctgcggaggatggggtaaaaatagaggaaaatagccttaaa
gaagaagagagcacagaaggagaaaaggaagtgaaatctgcagtccctgaggtgactgtg
gagagtgcacagacccctgcccctgcccctgcccctgcctctgcccctgaagatgaaaag
gcccctgctgaatcttctgagggcgaggagaaagtggaaaaggcagaggtgaaggagaga
acagaggagcctatggagacagaaaccaaaggcgctgctgaggtggagaaggtggaagag
aagtctgcagtagatctgacccctatcgtggtggaagacaaagaagagaagaaggaggaa
gaagagaaaaaggaggtgatgcttcagaatggagaaacccccaaggatcttagtgatgag
aagcagaagaaaaacatcaaacagcgcttcatgtttaacattgcagatggtggttttact
gagttgcactccctttggcagaatgaggagcgggcagccacagtcactaagaagacttac
gagatttggcaccgccggcatgactactggctgttggctggcattataaaccatggctat
gcccggtggcaggatatccagaatgacccacggtatgccatcctcaatgagcctttcaag
ggtgaaatgaatcgtggcaactttctagagatcaagaataagtttctagctcgaagattc
aagctcttagaacaagccctggtgattgaggagcagcttcgcagggcggcttacctgaac
atgtcagaggacccctctcacccgtccatggcccttaacacccgctttgctgaggtggag
tgtttggcagaaagtcaccagcacctgtccaaggagtcgatggcaggaaataagccagcc
aatgcagtcttacacaaagttctgaaacagctggaagaactgttgagtgacatgaaagct
gatgtgactcggctcccagctaccattgcccgaatccccccagttgctgtgaggttacag
atgtcagagcggaacattctcagccgcctggcaaacagggcaccagaacctcccccacag
caggtagcccagcagcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (13)   
   Pfam (13)   
All databases (46)   

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