KEGG   Musa acuminata (wild Malaysian banana): 104000823
Entry
104000823         CDS       T03447                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like isoform X1
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03013  Nucleocytoplasmic transport
mus03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104000823
   03015 mRNA surveillance pathway
    104000823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    104000823
Enzymes [BR:mus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104000823
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104000823
SSDB
Motif
Pfam: DEAD Helicase_C ResIII MazG
Other DBs
NCBI-GeneID: 104000823
NCBI-ProteinID: XP_009421236
UniProt: A0A804KW79
Position
10:22809087..22815311
AA seq 489 aa
MAENAAPPAKTEEKRSWADEESDEEKEAAAPPSQAADEAQPSELKKIESLSISDGKDSGE
RLLDDPDDSEIKAVTSGDTVYTSAVTFEDLKLSDELIKGLYVEMGFSKPSKIQAITLPMI
LTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPKRKIPQAICICPTRELAQQNHAVLLKMG
KYTGITSMCAIPSDSANYIPINKRPPVTEQVVIGTPGTIKKWTSAKKLSTRDMKILVFDE
ADHMLAEDGFRDDSERIMKEIQRSSGGCQVLLFSATFNEAVKAFVSRVIKDGNQIFVKKE
ELTLEKVKQYKVQCPDELSKVEVIKDKIFEFGQKVGQTIIFVRTRNSARMLHQSLTEEGY
ECTSVQGALKQEDRDQIIKEFKDGLTKVLITTDLLARGFDQRQVNLVINYDLPIKHDNPS
EPDCELYLHRVGRTGRFGSKGAVFNFLCTDRDRSVMEKIERHFQHHIPEIPNWRSEEDFE
SALKDAGLL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcggagaacgctgcgccgccggcaaagacggaggaaaagcggtcatgggccgacgaa
gagtcggacgaagagaaggaagccgccgcgccgccttcgcaggccgccgacgaagctcaa
ccctcggagttgaagaagatcgagtcgctctccatctccgacgggaaggacagcggtgaa
cgtctgctggatgatcccgacgattcggaaattaaagcggttacatccggtgatactgtc
tacacttctgctgtgacgttcgaagacttgaaattgtcggatgagcttatcaaagggttg
tatgttgagatgggttttagtaagcctagcaaaatacaggctattactctacctatgatt
ctcacgcctccgtataaagatttggtagctcaagctcacaatggctcagggaagaccaca
tgttttgtgcttggaatgttgagtcgagtcgatccaaagaggaagataccacaagccatc
tgcatctgccctactagagagttggctcagcagaatcatgcggtccttctgaagatggga
aagtatactggcataacttcaatgtgtgctattccatctgattctgctaattatattcca
ataaataaacgtccaccagtaactgagcaagtagtgattggcactccgggaaccattaag
aagtggacttcagcaaaaaaattgagcacaagggacatgaagatacttgtttttgatgag
gcagatcatatgctagccgaggatggctttagggatgattctgaaaggatcatgaaagag
attcaaagaagcagtggtggttgccaggtgcttcttttttctgctacattcaatgaagct
gtcaaggcatttgtatcaagggtaatcaaagatggaaatcaaatatttgtgaagaaagaa
gaactcacgttggaaaaagtaaagcaatataaggtccaatgtccagatgaactttccaaa
gtagaagtaataaaggacaaaatttttgaatttgggcaaaaagtaggacagactataata
tttgtccgtacaagaaatagtgctcgcatgttacaccaatcgttgaccgaagagggctat
gaatgtacatcagttcaaggtgctctcaagcaagaagacagagaccaaattataaaagaa
tttaaagatggattaaccaaagtcctcattacaactgatctccttgctcgaggttttgat
caaagacaggttaatttggttatcaactatgatcttcctataaagcatgacaatccatca
gaaccagattgtgaactatatctacatagagttggtagaactggccgctttggtagcaaa
ggtgctgtcttcaacttcttgtgcactgatagggacagatcagtcatggagaaaatcgag
cgtcatttccagcatcatattcctgagattcctaactggaggagtgaggaagattttgag
tctgctctgaaagatgctggtttgctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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