KEGG   Mannheimia sp. USDA-ARS-USMARC-1261: X781_3100
Entry
X781_3100         CDS       T03026                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
mvr  Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:mvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mvr03009]
    X781_3100
Enzymes [BR:mvr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     X781_3100
Ribosome biogenesis [BR:mvr03009]
 Prokaryotic type
  rRNA helicases
   X781_3100
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11
Other DBs
NCBI-ProteinID: AHG72459
UniProt: W0Q0H6
Position
328186..329508
AA seq 440 aa
MTFEELDLSPQLLKALVKKGYSRPTAIQQATIPAALEGRDLLGSAPTGTGKTAAFLLPAI
QHLLDYPRRKPGAPRILVLTPTRELAMQVAEQAEALAQFTNLSIATITGGVAYQNHGEVF
NSNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEADRMLQMGFGQDAEKIAAETRWRKH
TWLFSATLEGELLEDFSERLLNDPIKVDAEPSRRERKKIQQWYYHADNVEHKTKLLARLI
GEFSVEKAIVFVRRREDVRELSDTLRKRGLRSTYLEGEMAQTQRNQAITRLKEGVVNVLV
ATDVAARGIDIDDVDFVINYDLPYSADTYLHRIGRTARAGKKGSAVSLVEAHDYKLLGKI
KRYTEEALKPRIIEGLEPRTKAPKDGELNVTSKKEKARIKKKKEVKKEAAKQKVKVRHKD
TKNIGKRRKPSSASAAVKQA
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgacctttgaggagcttgatttaagcccccaacttctaaaagccttagtaaaaaagggc
tacagccgcccaacagcaattcaacaagccactattccagctgcccttgaagggcgtgat
ttactgggttctgctccaacaggcacagggaaaactgcagcattcttactgccggcgatt
caacatttattagactacccacgccgtaaaccgggagctccacgtattttggtacttaca
cctactcgagagctggcaatgcaagtggcggagcaagcagaagcgctggcacaatttacc
aacttaagtattgcgaccattacaggtggagtggcgtatcaaaatcacggcgaagtcttt
aacagtaatcaagatattgtggtagcaacaccgggtcgtttgatgcaatatatcaaagaa
gaaaactttgattgccgagcggttgaagtgctgatttttgacgaagcagaccgaatgtta
caaatgggctttgggcaagatgcagagaaaattgcggcagaaacccgttggcgtaaacat
acttggttattctcagccactcttgaaggggagttgttagaggatttctctgagcgatta
ttaaatgacccaataaaagtagatgcagagccaagccgccgtgagcgtaagaaaatccaa
caatggtattatcacgctgataacgtggagcataaaaccaaattgttggctcgccttatc
ggagaattttcagtggaaaaagcaattgtgttcgttcgtcgccgtgaagatgtgcgagag
ctaagcgatacacttcgcaaacgtggtttgcgttctacttaccttgaaggcgaaatggca
caaacccaacgtaatcaggcgattacccgcttaaaagagggcgttgtgaatgttcttgtt
gcgaccgatgtggcggctcgtggtatcgacattgacgatgtggatttcgtgatcaactac
gatttgccatatagtgccgacacttacctccaccgcatcgggcgaactgctcgtgcaggc
aaaaaaggctcagcagtttcgctagtagaagctcacgattacaagctgctcggtaaaatc
aagcgttatacggaagaagcattaaagccgcgtattatcgaaggcttagaacctcgcacc
aaagccccgaaagatggcgagttgaatgtaacgagcaaaaaagaaaaagcccgcattaaa
aagaaaaaagaggtgaaaaaagaagcggcgaagcaaaaagtaaaagttcgccataaagac
accaaaaatatcggtaaacgccgcaagccaagcagtgcatcggcagcggttaaacaggca
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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