KEGG   Mycobacterium sp. EPa45: AB431_24700
Entry
AB431_24700       CDS       T03960                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mye  Mycobacterium sp. EPa45
Pathway
mye03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mye00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AB431_24700
  09124 Replication and repair
   03420 Nucleotide excision repair
    AB431_24700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mye03021]
    AB431_24700
   03400 DNA repair and recombination proteins [BR:mye03400]
    AB431_24700
Enzymes [BR:mye01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AB431_24700
Transcription machinery [BR:mye03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AB431_24700
DNA repair and recombination proteins [BR:mye03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AB431_24700
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AKK29338
UniProt: A0A0G3IP55
Position
5226384..5228033
AA seq 549 aa
MTEGPLIVQSDKTVLLEVDHELAGAARSAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVL
RNKKISPMLGARIDDDTVIVHPSERGRIKQMLLKIGWPAEDLAGYVNGEAHPIDLSQDGW
ELRDYQQMAADSFWDGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMLYAVAEPDERYKLCSTAHSKIAVVKSILAKHPGEPTLVIGAYLD
QLDELGAELGAPVIQGSTKNAEREALFDAFRRGEVKTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAI
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgactgaaggtccattgatcgtgcagtccgataaaaccgtgctgctcgaagtcgaccat
gaactcgccggtgcggcccgttctgcaatcgccccgttcgccgaactcgaacgcgcgccc
gagcacatccacacctaccgcatcaccccgctggcgctgtggaacgcccgcgccgccggc
catgacgccgagcaggtggtcgacgcgctggtcagcttctcgcgctatgccgtaccgcag
ccgctgctggtcgacatcgtcgacacgatggcgcgctacggccggctgcagctggtcaag
agcccggttcatggcctggttctggtcagcctcgatcgggccgtgctcgaagaggtgctg
cgcaacaagaagatcagcccgatgctgggcgctcgtatcgacgacgacacggtgatcgtc
catcccagtgagcgcggccggatcaagcagatgctgctcaagatcggctggccggccgag
gacctggccggctacgtcaacggcgaggctcacccgatcgatctctcgcaggacggctgg
gaactccgcgactatcagcagatggccgccgattctttctgggacggcggctcgggtgtg
gtggtccttccgtgcggagcgggtaagacgctggtcggcgcggccgcgatggccaaggcc
ggcgcgacgacgctgatcctggtcaccaacaccgtcgcggggcggcagtggaaacgggag
ctgatcgcacggacatcgctgaccgaggaggagatcggcgagtactccggtgagcgcaag
gagatccgaccggtcaccatcgccacatatcaggtgatcacccgccgcaccaagggcgag
tacaagcatcttgagctgttcgacagccgcgactggggcctgatcatttacgacgaggtg
cacctgctgcccgcgccggtgttccgcatgaccgccgacctgcagtcccgtcgccgactg
gggcttactgcaacgttgatccgcgaggacggccgcgagggcgacgtgttcagtctcatc
ggccccaagcgatacgacgctccgtggaaggacatcgaggcccagggttggatcgccccg
gcggagtgcatcgaggtgcgcgtgacgatgaccgacaacgagcggatgttgtacgcggtc
gccgaacctgacgagcgctacaaactctgctcgaccgcacactcgaagatcgcggtggtg
aaatcgatcctcgccaagcatcccggcgagccgacgctggtgatcggggcctacctcgat
cagctcgacgagctcggcgccgaactgggcgcaccggtgatccagggttcgacgaagaac
gcggagcgcgaagcgctcttcgacgccttccgccgcggtgaggtcaagacgctcgtggtc
tccaaggtggcgaacttctcgatcgacctgccggaagcctccgtggccgttcaggtttcg
ggtactttcgggtcccgccaggaagaggcccagcggctgggccggttgcttcgtcccaag
cacgacggcggtggggcggtcttctactccgtggtctctcgcgacagcctggacgccgag
tacgccgcacaccggcagcggttcctcgccgaacagggctacggctacgtcatcaaagac
gccgacgacctgctcggtccggcgatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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