KEGG   Maylandia zebra (zebra mbuna): 101487140
Entry
101487140         CDS       T02814                                 
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03022  Basal transcription factors
mze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101487140 (ercc2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101487140 (ercc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mze03021]
    101487140 (ercc2)
   03400 DNA repair and recombination proteins [BR:mze03400]
    101487140 (ercc2)
Enzymes [BR:mze01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     101487140 (ercc2)
Transcription machinery [BR:mze03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101487140 (ercc2)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101487140 (ercc2)
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 ResIII DEAD SesA
Other DBs
NCBI-GeneID: 101487140
NCBI-ProteinID: XP_004569677
UniProt: A0A3P9DDQ6
Position
LG14:complement(32626140..32634404)
AA seq 760 aa
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAFPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYTKETGESNNFLALALSSRKNLCIHPE
VSSLRFGKEVDGKCHSLTASYVRAQHHSNPNLPVCRFYEEFDSVGRQVPLPAGIYNLDDL
KAFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQTNVDTLQNTIHKIKETDAAKLREEYRRLVEGLKEANVARE
TDIYLANPVLPDEILQEAVPGSIRTAEHFVGFMRRFLEYLKSRLRVQHVVQESAPQFLKD
IFEKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPRILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYVYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHINDGSLNLTVDEAVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLESEEMLQKITQIAHQT
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgaagctcaacattgagggtctgctggtgtattttccctatgactacatctaccccgag
cagtactcctacatgctggagctgaagaggacgctggatgccaagggtcatggagtcttg
gagatgccatcgggaacagggaagaccatctctctactgtccctcattgtggcctaccaa
agggctttccctctggaggtcaccaagttaatttactgctctagaacagttccagagatc
gagaaggttgtggaggagctgaggaagctgatggagttttacactaaagaaacaggagag
agcaacaacttcctggctcttgctctttcctccaggaagaacctctgcatccaccctgag
gtgagctctctgcgcttcggtaaggaagtcgatgggaagtgccacagtctgacagcatcg
tacgtccgcgcacaacatcacagcaaccccaacctgcccgtctgtcgcttctacgaggag
ttcgattcagtcggccgacaggtgcctcttcctgctggcatctacaaccttgatgacctc
aaggcctttggcaggaggaagggctggtgtccttactatctggctcgctattcaatcctg
catgccaacattgtggtgtacagctaccactacctgctggaccccaagatagctgatctg
gtgtctaaagagctggcaaagaaatctgtagtggtatttgatgaggctcataatatcgac
aacgtgtgcatcgactccatgagcgtaaatatcaccaggcgaacgctggaccgctgtcag
accaacgtggacactctccagaacaccatacacaagataaaggagacggatgctgctaag
ctgagggaggagtacagacgcttggtggaggggctgaaggaagccaatgtggcgagagaa
accgacatctacctcgcaaatccggtgttgcctgatgaaatccttcaagaggcggtgcct
ggctctattcgtacagccgagcactttgtaggtttcatgagacgcttcctggagtatctg
aagtctcgtctgagggtccaacacgtcgtacaggagagcgcgccgcagttccttaaagac
attttcgaaaaagtctgcatcgaccgcaagcctctaaggttttgtgcagagcggttgcag
tcgttgcttcgaactctggagatcgccgacatcgcagacttctcagctgttactctcatc
tcgaacttcgccactctcgtcagcacctacagccaaggcttcaccatcatcatcgagccc
tttgaagacagaactccgaccatcgccaaccccgtgctgcatttcagctgcatggacccg
tctatagccatcaaaccagttttccaaagattccagtcagtcgtcatcacctcagggaca
ctttcccccctggacatctatccccgcatccttgactttcgcccggttaccatggcgtcc
ttcaccatgacactggcgcgcacctgcctctgccctctgattgttggcagaggaaacgac
caggtggccctgagctccaagtttgagaccagagaagatttcgctgtgattcggaattat
ggtaacctgcttctggagatgtctgcgatcgttcccgatgggattgtggcgtttttcacc
agctacgtctacatggagaacatcgtggcgtcctggtatgaacagggtatcctggagaat
atccagagaaacaagctgatcttcatcgagactcaggatgctgcagagacgagcatggcc
ctggagaaataccaagaggcgtgtgagaacggccgaggagcaatcctcctgtctgtggcc
agaggaaaagtgtctgaagggatcgatttcgtgcaccattatggccgtgctgtcatcatg
tttggagtgccgtatgtttatacgcagagccgcatcctaaaggctcggctggagtacctt
cgggatcagtttcagatcagggagaacgactttctgacgtttgacgccatgcgccacgcg
gctcagtgcgtaggcagagccatccgaggcaaaactgactatggactcatgatttttgct
gacaagcgttacgcacgagcagacaaacgtgggaagctaccccgctggattcaggagcac
atcaacgacggcagtctgaacctcactgtggacgaggccgtgcagctttccaagcacttc
ctgcggcagatggctcagcctttcagacaggaggaccagttgggtttgtctctgctgact
ctcgagcagctggagtcggaggaaatgctgcagaaaatcactcagattgctcatcagacc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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