KEGG   Candidatus Nanopelagicus abundans: B1sIIB91_03830
Entry
B1sIIB91_03830    CDS       T05091                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
nab  Candidatus Nanopelagicus abundans
Brite
KEGG Orthology (KO) [BR:nab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nab03032]
    B1sIIB91_03830
   03036 Chromosome and associated proteins [BR:nab03036]
    B1sIIB91_03830
   03400 DNA repair and recombination proteins [BR:nab03400]
    B1sIIB91_03830
DNA replication proteins [BR:nab03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    B1sIIB91_03830
Chromosome and associated proteins [BR:nab03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    B1sIIB91_03830
DNA repair and recombination proteins [BR:nab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      B1sIIB91_03830
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 Ribosomal_60s
Other DBs
NCBI-ProteinID: ASY24032
UniProt: A0A249L4Q3
Position
complement(740527..740931)
AA seq 134 aa
MNKAQFIAYLAPQFGDSKKEAARAIEVVFDAVVRNISKGEDVMINDFGKFKKVDRPARKG
RNPFTGESIQIKASKKVRFLPAKGLKEVISGARKLGAAPTPPAKVAPVKAAKKAGKAKKV
SRKPARKAKKSKRR
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaacaaggcccagttcatcgcttacctagcaccacaatttggtgatagtaagaaagaa
gctgctcgcgctattgaggttgtttttgatgcggtagttcgcaatatctcaaagggtgaa
gatgtaatgattaatgatttcggtaagtttaagaaagttgatcgtccagcacgtaaggga
cgtaatccatttaccggtgaatcaattcagattaaagccagcaagaaggttcgctttcta
cctgcaaagggtttgaaagaagttatctctggcgcacgtaaattaggtgcagcaccaaca
ccaccagcaaaagtagcgccagtaaaggctgctaagaaagctggcaaggcaaagaaggtt
tctcgtaagcctgctagaaaagcgaagaagtcaaagcgtcgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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