KEGG   Nocardiopsis alba: B005_3162
Entry
B005_3162         CDS       T02218                                 
Name
(GenBank) small GTP-binding domain protein
  KO
K02355  elongation factor G
Organism
nal  Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:nal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:nal03012]
    B005_3162
   03029 Mitochondrial biogenesis [BR:nal03029]
    B005_3162
Translation factors [BR:nal03012]
 Eukaryotic type
  Elongation factors
   B005_3162
 Prokaryotic type
   B005_3162
Mitochondrial biogenesis [BR:nal03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    B005_3162
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Ubiquitas transcription factors
    B005_3162
SSDB
Motif
Pfam: EFG_IV GTP_EFTU EFG_III EFG_C MMR_HSR1 GTP_EFTU_D2 AAA_16 ABC_tran nSTAND1 AAA_29 AAA_33 AAA_21 SRPRB AAA_22 Septin Roc AAA RsgA_GTPase SMC_N AAA_28 YobI-ATPase AAA_5 AAA_23 cobW IstB_IS21 Dynamin_N
Other DBs
NCBI-ProteinID: AFR07000
UniProt: J7L6D4
Position
complement(3294479..3296623)
AA seq 714 aa
MVDRTVAAPRAEEPRDIRNVALVGPSGSGKTSLVEALLAESGEIRRPGNVEEGTTVSDHD
GIEIRRHRSARLTLAPVMVDGVKVNLLDTPGHPDFLGAARAGLRGADAALFVISAMDGVD
GRTRSLWRECAALGIPRAVAVTGIDHPRADFDAVVARCREAFGPGVHAAYVPAFEGSGDR
RSLVGLWGLISERYYDYSGGEAVPRPVPARLREASGPLREILVEEVITESEDETLMERYM
EGGELDPDLLIADVQRAVAAGGFHPVLALDTIRGVGVRELLRELPLSCPDPTRRPLPHVE
RPDGREVEGMSCDPEGPLVAEVLSTENDPYVGRMSLVRVFSGTLAPEVDVHLSGAVSDEE
ERAGEREHSGSPFVPAGPRALPVGEVFAGDLCLVSKLMSARTGDTLSSTERPLRVRPWTF
PDPMMPVAIAAASSADEDRLSRAVARLVSEDPSLRVEVDSETRQMVLWSLGEAHLEAALD
RLESHHGVRVDTEEPRVPLRETFTVPGQGVGRNVKQSGGHGEYGVCRIRVEPLESGAGLE
FVDRIVGGVVPRRYVPAVEKGIRAQMADGIGDGFPLVDLRVTLYDGQAHAVDSSDMAFQK
AGRLAIRDAATTCEPALLEPLDTVTVEVEGSDLGAVLNDLSARRGRVVGTETVDDGRVVV
RAEVPELEIVRYAVELRALSHGTGTFTRSYLRHERLPGHLEHRVARPRSGDRDT
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggtcgatcggaccgtagccgcgccgagggccgaagagccccgtgacatccgcaacgtc
gccctggtcggaccgtccggttccggcaagacgagcctggtcgaggcgttgctggccgag
agcggggagatcaggcgccccggcaacgtcgaagagggcaccaccgtcagcgaccacgac
gggatcgagatccgacggcaccgctcggcgcgcctgaccctcgcccctgtgatggtggac
ggggtcaaggtgaacctgctggacaccccgggccaccccgacttcctcggggccgcccgc
gccgggctgcgcggagccgacgccgctctgttcgtgatctccgccatggacggggtggac
gggcggacccggagcctgtggagggagtgtgccgccctgggcatacccagggcggtcgcg
gtcaccgggatcgaccacccgcgcgccgacttcgacgccgtggtggcccgctgccgggag
gccttcgggccgggggtgcacgccgcctacgtacccgctttcgaggggagcggggatcga
cgctccctggtggggctgtggggactgatctccgagcgctactacgactactccggtggg
gaggccgtgccccgccccgtccccgcccggctgcgcgaggcctccgggccgctccgggag
atcctcgtcgaggaggtgatcaccgagagcgaggacgagacgctcatggagcgctacatg
gagggcggagaactcgacccggaccttctgatcgccgacgtgcagagggcggtggccgcc
ggcgggttccaccccgtgctggccctcgacacgatccggggcgtgggggtgcgcgagctg
ctccgcgagctgccgctgtcctgccccgatccgacccggcggccgctcccccacgtcgag
aggcccgatgggagggaggtcgaggggatgtcctgcgacccggaggggccgctggtcgcg
gaggtgctgagtacggagaacgacccgtacgtggggcggatgagcctggtccgggtcttc
tccgggaccctggcgcccgaggtcgacgtccacttgtccggagccgtctccgacgaggag
gagcgggcgggcgaacgagagcactcgggttcgccgttcgtccccgcgggcccgcgggcc
ctcccggtgggagaggtgttcgccggcgacctgtgcctggtgtccaagctgatgtcggcc
cgtaccggggacaccctctcctccaccgagaggcccctgcgcgtccgtccctggaccttc
cccgacccgatgatgccggtggcgatcgccgccgcgtcctccgccgacgaggatcggctc
tcccgcgcggtggcccgtctggtctccgaggacccctccctccgggtggaggtcgattcc
gagacccgccagatggtcctgtggagtctgggcgaggcccacttggaggcggccctggac
cggttggagagccaccacggtgtccgggtggacaccgaggagcctcgggtaccgctccgg
gagaccttcaccgtgcccggacagggggtcggtcgcaacgtcaagcagagcggcggccac
ggagagtacggggtgtgccggatccgggtggagcccttggagtcgggtgccgggctggag
ttcgtcgaccggatcgtcggtggtgtcgttccgcgtcggtacgtccccgcggtggagaag
gggatccgcgcccagatggccgacgggatcggcgacgggttcccgttggtcgacctgcgc
gtgacgctgtacgacggccaggcgcacgcggtggactcctccgacatggccttccagaag
gccgggaggctggcgatccgggacgccgccaccacctgcgaaccggcgctgttggagcct
ctggacaccgtgaccgtcgaggtggaggggtccgatctgggcgccgtcctcaacgatctc
tcggcgcgccgcggtcgcgtggtcggtacggagaccgtggacgacggccgtgtggtggtc
agggccgaggtaccggaactggagatcgtgcgttacgccgtcgagttgcgggccctgtcc
cacggaacggggacgttcacccgttcctacctgcgtcacgagcgtcttcccggacacctg
gagcaccgggtggcccgaccccgttccggggaccgggacacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (34)   

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