KEGG   Notothenia coriiceps (black rockcod): 104943456
Entry
104943456         CDS       T04920                                 
Symbol
pus3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ncc03016]
    104943456 (pus3)
Enzymes [BR:ncc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     104943456 (pus3)
Transfer RNA biogenesis [BR:ncc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    104943456 (pus3)
SSDB
Motif
Pfam: PseudoU_synth_1 Tropomyosin STI1-HOP_DP
Other DBs
NCBI-GeneID: 104943456
NCBI-ProteinID: XP_010767160
UniProt: A0A6I9MZR8
Position
Unknown
AA seq 477 aa
MSKALTRRIKELEEEWGKLRSELKERSEAGEDSELTSNPSTHENTDSKPDVNTSSCKKGK
KVAKERAFDFSAHPRRHVALRLAYLGWSYQGFAVQDNTDNTVEARLFEALLKTRLIQDRQ
SSNYHRCGRTDKGVSAFSQVITIDLRSTQFCGGLGISVPEHVDVSIKNKATGSEVPYVKM
LNRVLPLDIRILDWSPAAEGFSARFDCKSRTYRYYFPRGSLDVTLMAEAAKRYEGTHDFR
NLCKMDVGNGVLQFERTILSASVKPVQPQDISGTGPYDVFIFEIKGLAFLYHQVRCMMAL
LLLIGQKLEDPELIDKLMDVQSNPRKPQYSMAVDYPLVLHDCQFQGLAWEQDIEEVSHVL
SELQQHWTQSTVRSHVLHGMIQGLEAAGGVSSNACCLVEGSKQRNYRPLLERPCCESLES
RINHFVKRGRLEREEGENGGETVHRGKKSKHSHSSPSLPVSSEMSSPKQSTDEKAED
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtccaaggctttaaccaggagaataaaggagctggaggaagaatgggggaagctcagg
tccgagctgaaggagagaagtgaagctggagaggattcagagctgacgtccaatccatcc
actcatgaaaacactgactccaaacctgatgttaacaccagcagctgtaaaaagggtaag
aaagtagccaaagagcgtgctttcgacttctctgcacaccctcggcgacatgtggctctg
cggctggcttacctgggatggtcctaccaagggtttgcagttcaggataacactgacaac
accgtggaggccagactctttgaagctttgctgaagacgcggctgatccaggacaggcag
agctccaactaccaccggtgtggtcgcactgataaaggagtcagtgccttttcccaagtc
ataacaatcgatttgcgctccacacagttttgtggaggactgggcatctcagttcctgaa
catgttgatgttagcatcaagaacaaagctactggcagtgaggttccctatgtgaagatg
ctgaacagagtcctgcctctggacattaggatcttggactggtctccagctgcagagggc
ttcagcgctcgctttgactgcaagtctcgcacgtaccgatactacttcccccgcggatcc
ttggatgtgacactgatggcagaggcggcaaaaagatacgagggaactcatgactttcgc
aacctgtgcaaaatggacgtgggaaatggagtccttcaatttgagcggaccatcttgtct
gcatcagtaaagcctgtgcagcctcaggacatctccggcactggcccatatgatgtgttc
atatttgaaataaaaggattggccttcctgtaccatcaggtacgatgcatgatggcactc
cttctcctgatagggcagaaactggaagacccggagctaattgataagctcatggatgtt
cagagtaaccccaggaagccacaatacagtatggcagtagactacccgctggtgctgcac
gactgccaatttcaaggtctggcctgggaacaggacattgaagaggtgagccacgtcctg
tctgagcttcagcagcactggacccagagcactgtccggagccacgtcctgcacgggatg
atccagggtttggaggccgcaggtggagtgtcctccaatgcctgctgtctagtagaaggc
agcaagcagagaaactaccggcccctgcttgagcgtccgtgctgcgagagcctggagtcc
aggataaaccattttgtcaaaagaggcaggctggagcgggaggaaggggagaatggaggt
gaaacggtgcacagagggaaaaagtccaaacattcccacagttcccctagtctgcctgtt
tcatcagagatgtcatcaccaaaacaaagtacagatgaaaaagcagaagattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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