KEGG   Notothenia coriiceps (black rockcod): 104959361
Entry
104959361         CDS       T04920                                 
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
  KO
K04659  thrombospondin 2/3/4/5
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04145  Phagosome
ncc04510  Focal adhesion
ncc04512  ECM-receptor interaction
ncc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104959361 (comp)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104959361 (comp)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104959361 (comp)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104959361 (comp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104959361 (comp)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104959361 (comp)
   00536 Glycosaminoglycan binding proteins [BR:ncc00536]
    104959361 (comp)
Membrane trafficking [BR:ncc04131]
 Endocytosis
  Phagocytosis
   Opsonins
    104959361 (comp)
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104959361 (comp)
  Exosomal proteins of colorectal cancer cells
   104959361 (comp)
  Exosomal proteins of bladder cancer cells
   104959361 (comp)
Glycosaminoglycan binding proteins [BR:ncc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104959361 (comp)
SSDB
Motif
Pfam: TSP_C TSP_3 EGF_CA COMP EGF_3 EGF cEGF
Other DBs
NCBI-GeneID: 104959361
NCBI-ProteinID: XP_010785539
UniProt: A0A6I9P4X7
Position
Unknown
AA seq 748 aa
MLWFLLLNCALCMGGHSAAGQRDGEIISQIKMTNFALDEIKELLKQQIKEIVFLKNTVME
CEACGMGGMQPRPSCVPNPCHPGVKCKETPQGVKCGPCPGGTEGNGTHCTDVDECTVMPC
HMGVRCINTSPGFRCGSCPAGYTGPQVQGVGLAYATANKQVCKDINECEGINNGGCVENS
VCMNTPGSYRCGPCKTGYIGDQRRGCKPERACGNGQPNPCHASAECIVHREGRIECQCGV
GWAGNGYHCGPDIDIDGIPDEKLACPEKTCNKDNCLTVPNSGQEDADGDGMGDACDEDAD
GDGIFNMQDNCVLVPNVDQRNADEDDFGDACDNCRAVKNNDQRDTDVDQYGDECDEDIDG
DGILNHLDNCKKVPNADQKDRDGDKVGDACDSCPYIPNPDQMDADNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGQGDECDDDDDNDGIPDLLPPGPDNCRLIPNPLQE
DSNGDGVGNICEADFDNDTIIDTIDVCPENAEVTDTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAEPGIQLKAVKSNTGPGENLRNALWHTGDTSDQVKLLWKDARN
VGWKDKTSYRWFLQHRPADGYIRVRFYEGPKMVADTGVIIDATMRGGRLGVFCFSQENII
WANLRYRCNDTLPEDFDTYRAKQVRLAV
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgctgtggtttctgctgctgaactgtgcgctctgcatgggaggacactctgcagcagga
cagagagatggggaaattatcagtcagataaaaatgacaaacttcgcactggatgagatc
aaagagcttttgaaacaacagataaaagagattgttttcctgaagaacacagtgatggag
tgtgaagcctgtgggatgggaggaatgcagcctcgtccctcctgcgtgccgaacccctgc
cacccaggggtgaagtgcaaggagacacctcagggtgtgaagtgcggaccctgtcctggg
ggcacggagggcaacggtacccactgcactgatgtcgacgagtgtacagttatgccgtgt
cacatgggtgtgcgctgcataaacacctccccaggtttccgctgcggctcctgtcctgct
gggtacaccggcccccaggtccagggcgtcggactcgcctacgccaccgccaacaaacag
gtctgcaaagatatcaatgagtgtgaaggcatcaacaatggaggctgtgtggagaactct
gtctgtatgaacacgcctgggtcctacaggtgcggcccctgcaagacgggctatattgga
gatcagcggcgcggctgtaagccagagagagcctgtggaaatggccagcccaacccctgc
cacgccagcgccgagtgcatcgtccatcgagagggtcgcatcgaatgtcagtgtggagtc
gggtgggctggaaacggctaccactgcggccctgacattgacatcgatggtatccctgat
gagaaattggcctgtcctgagaagacctgcaacaaggataattgtctcactgttcccaac
tctggtcaagaagatgccgatggtgacggcatgggagacgcctgcgatgaagacgcagat
ggggacgggatcttcaacatgcaggataactgtgtgttggtgcctaatgttgaccagagg
aacgccgatgaagatgactttggcgatgcatgcgacaactgccgcgcagtgaaaaacaac
gaccaaagagacacggatgtggaccaatatggtgacgagtgtgatgaagacatcgatggg
gatggaatccttaatcacctggataactgcaaaaaagttcccaacgctgaccagaaggat
cgtgatggagacaaagtgggagacgcctgcgacagctgtccttatatcccaaacccagac
cagatggatgctgacaacgacttgattggagatccctgtgacaccaacaaggacagtgac
ggtgacgggcaccaggactcgagggacaactgtccggccgtcatcaacagctcccagctg
gacacggacaaggacggccagggggacgagtgtgacgatgacgacgataacgacggcatc
cctgacctgctgccccccggtccggataactgccgtctgatccccaacccgctgcaggag
gactcgaacggtgatggcgttggcaacatttgcgaggcggatttcgacaatgacaccatc
atcgacactatcgacgtttgtccagaaaacgctgaggtcaccgacactgacttcagggag
taccagaccgtcgttttggatccggagggcgacgcacagatcgaccccaactgggtggtg
ctgaaccagggaagagagatagtccagactatgaacagtgatcctgggttggcagtgggt
tacacggctttcagcggtgtggactttgaagggacctttcatgtaaatacggtgacggac
gatgactatgcaggatttatcttcggctaccaggacagctccagtttctacgtggtgatg
tggaagcaggtggaacagatctactggcaggcgaacccgttcagagccgtggcagaacct
ggcatccagctgaaggccgtcaagtcgaacacgggtccaggggagaacctgaggaacgcc
ctgtggcacaccggagacaccagcgatcaggtcaaactcctctggaaagacgctcgcaat
gtcggctggaaggacaagacttcttaccgctggttcctccagcaccgacccgcagacggc
tacatcagagtacgtttctacgagggtcctaagatggtggcggacacaggcgtcatcata
gacgccacgatgagaggaggtcgactgggagtcttctgcttctcccaggagaatatcatc
tgggccaacctgcgttatcgctgtaatgacactctccctgaggacttcgacacttacaga
gccaagcaggtccggctggcggtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

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