KEGG   Notothenia coriiceps (black rockcod): 104964865
Entry
104964865         CDS       T04920                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104964865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncc03021]
    104964865
   03036 Chromosome and associated proteins [BR:ncc03036]
    104964865
Transcription machinery [BR:ncc03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     104964865
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    104964865
   RSF complex
    104964865
   WICH complex
    104964865
   B-WICH complex
    104964865
   NORC complex
    104964865
   BRF complex
    104964865
   NuRF complex (fruit fly)
    104964865
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD DBINO HDA2-3 SWI2_SNF2 ERCC3_RAD25_C AAA_14
Other DBs
NCBI-GeneID: 104964865
NCBI-ProteinID: XP_010792059
UniProt: A0A6I9PLX1
Position
Unknown
AA seq 578 aa
MSELLSCVEQREEPTEVPKPEPAEEKEESSDEGKESASEAGADVQDATSSTKPKETGLGY
EEKVLTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRMKNDEKQNLLSAGD
NRHRRTEQEEDEELLSESTKTTNVCVRFDDSPSYVKQGKMRDYQVRGLNWLISLYENGIN
GILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCL
IGSREQRNALVRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKL
SEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDTKL
VERLHTVLRPFLLRRIKADVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGK
MDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDSHLVVNSGKMVVLDKLLPKMKQQGS
RILIFSQMTRVLDILEDYCMWKNYGYCRLDGQTPHEERQISINAYNEPNSSKFIFMLSTR
AGGLGINLATADVVILYDSDWNPQVDLQAMVSTSLVLT
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtccgaactcctaagctgcgtggaacagcgggaagaaccgactgaagttccaaaaccc
gaaccagcagaggagaaggaagagtcttcagatgaagggaaagagtcggcctcagaggct
ggggctgatgtacaagatgccacttcctctaccaaacctaaagaaactggtctggggtat
gaggagaaagtgctcacagaccggaccaacagatttgagtacctgctcaagcaaacagag
ttgtttgctcatttcatccaaccagccgcacagaagacccccacctccccgctgaagatg
aagccagggcgtcctcgcatgaagaacgatgaaaaacagaatctgctgtctgccggagac
aaccgacaccgccgcacagagcaagaggaggacgaagagcttctgagcgagagcaccaaa
actactaacgtctgcgttcgctttgatgactccccctcctatgtcaaacaagggaaaatg
agagactatcaggtccggggtctgaactggctcatatctttgtatgagaacggcatcaac
ggcatcctcgctgatgaaatgggtttggggaagactctgcagaccatttctctgctgggt
tacatgaagcattacaggaacatccctggtccccacatggtgctagtgcccaagtccacc
ctctacaactggatgaatgagttcaagagatgggtgccttcgctgcgcgccgtctgcctg
atcggaagcagagagcagaggaatgccctggtcagagatgtgctgctgcccggagaatgg
gatgtgtgcgtcacatcctacgagatgctcatcattgaaaaggcagtgttcaagaagttc
aactggagatacctggtcattgacgaagcccacagaatcaagaatgagaaatcaaagctg
tcagagatcgtgcgagaatttaagaccaccaatcgtttgctgctgaccggaacccccctg
cagaacaacctccacgagctgtgggctctgctcaacttcctgctgcccgacgtctttaac
tcatcagaggactttgattcctggttcgacacaaacaactgcttgggtgataccaagttg
gtggaacgtcttcacactgtgctgcgtcccttcttgctccgtcgtatcaaagcggacgta
gagaaaagtctgcttccgaaaaaagagatcaagatgtacgtgggcctgagtaagatgcag
cgagagtggtacacaaagatcctgatgaaggacatcgacattctgaactcagcgggtaag
atggacaagatgcgtctgctgaacgttctcatgcagctgaggaaatgctgcaaccacccg
tacctgtttgacggggccgagcccggacccccgtacaccaccgacagccatctggtggtg
aacagcggcaagatggtggtgctggacaagctgctacccaagatgaagcagcagggctct
cgtatcctcatcttcagtcagatgacccgggtgctggacatcttggaggattactgcatg
tggaagaactatggctactgccgcctggatggccagacgccgcacgaggagagacagatc
tctatcaacgcatacaatgagcccaacagctccaagtttatcttcatgttgagcaccaga
gctggaggactgggtatcaacctggctacagctgatgtggtcatcctgtacgactcggac
tggaacccccaggtcgacctgcaggccatggtgagtacatccctagtcctaacatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

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