KEGG   Notothenia coriiceps (black rockcod): 104967532
Entry
104967532         CDS       T04920                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
  KO
K06058  deltex [EC:2.3.2.27]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    104967532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104967532
Enzymes [BR:ncc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104967532
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104967532
SSDB
Motif
Pfam: DTC zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_10 zf-RING_5 zf-rbx1 Baculo_IE-1 zf-RING_11 Prok-RING_4 zf-RING_6 zf-C3HC4_5 zf-RING_4
Other DBs
NCBI-GeneID: 104967532
NCBI-ProteinID: XP_010795323
UniProt: A0A6I9Q3L6
Position
Unknown
AA seq 185 aa
MEDCAICLDTVHERKTLKCSHSFCTACIDSVFKLKPACPICNTYYGEYTGNQPEGSMTDM
RSCQRLPGFEHCGSIVIQYTFPAGTQGPEHPNPGKRYGSTSRTAFLPDSEEGEKVLKLLR
KAFDRRLVFTVGRSVTTGLNNVITWNDIHHKTNIDGGPQSFGYPDPDYLSRVQEELCLKG
VTPDD
NT seq 558 nt   +upstreamnt  +downstreamnt
atggaagactgcgcgatttgcttggacacagttcatgagaggaaaacgttaaagtgctct
cactctttttgcactgcttgtatcgactcggtttttaagttgaagcctgcttgtccgata
tgcaatacctactacggagagtacacggggaaccagccggagggcagcatgacggacatg
cgcagctgtcagcgcctgcccggcttcgagcactgcggatctatcgtcatacagtacact
ttcccagcggggacacaagggcctgaacatccaaaccccgggaagaggtacggcagcacg
tctcgtacggccttcctgccagacagcgaggaaggggagaaagtcctgaagctgctgagg
aaggccttcgacaggagactcgtcttcaccgttggtcgatccgtcaccacaggcctcaac
aacgtcatcacctggaacgacattcatcataagaccaacatagatggtggtccacaaagt
tttggatatccagatccagattatttgtccagagttcaagaggagctttgtcttaaagga
gtcacaccggatgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system