KEGG   Neorhizobium sp. NCHU2750: NCHU2750_57200
Entry
NCHU2750_57200    CDS       T05650                                 
Symbol
virD4
Name
(GenBank) type IV secretion system protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
nen  Neorhizobium sp. NCHU2750
Pathway
nen03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nen00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NCHU2750_57200 (virD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nen02044]
    NCHU2750_57200 (virD4)
Enzymes [BR:nen01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     NCHU2750_57200 (virD4)
Secretion system [BR:nen02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   NCHU2750_57200 (virD4)
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AYD05093
Position
pTiNCHU2750:208596..210602
AA seq 668 aa
MNSSKTTPQRLAVSIVCSLAAGFCAASLYVTFRHGFNGEAMMTFSVFAFWYETPLYMGHA
TPVFYCGLAIVVSTSIVVLLSQLIISFRNHEHHGTARWAGFGEMRHAGYLQRYNRIKGPI
FGKTCGPRWFGSYLTNGEQPHSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFEL
TSRARKAGGDAVFKFSPLDPERRTHCYNPVLDIAALPLERQFTETRRLAANLITAKGKGA
EGFIDGARDLFVAGILTCIERGTPTIGAVYDLFAQPGEKYKLFAHLAEESRNKEAQRIFD
NMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDLRRKRTCVYLCVSPNDL
EVVAPLMRLLFQQVVSILQRSLPGKDERHEVLFLLDEFKHLGKLEAIETAITTIAGYKGR
FMFIIQSLSALTGTYDDAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFKARSTSY
SQARMFDHNIQISDQGAPLLRPEQVRLLDDNNEIVLIKGHPPLKLRKVRYYSDRMLRRLF
ECQIGALPEPASLMLSEGVHRDGQDLSQHAAVTEAQGLGDIDSIPNNMEAATPQNSEMDD
EQDSLPTGIDVPQGLIESDEVKEDAGGVVPDFGVSAEMAPAMIAQQQLLEQIIALQQRYG
PASSHSVK
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgaattcgagcaagactacgccccagcgtttagctgtcagcatcgtatgttcgctggca
gccggtttttgcgcggcaagtctctatgtaacatttcgccatggtttcaatggcgaagcg
atgatgacgtttagcgtcttcgccttttggtacgagaccccgctctatatgggtcatgcg
acccccgtcttctattgcggtttagccattgtcgtctcgacgtctattgttgtgctgtta
agccaacttatcatatcgtttcgcaatcacgagcatcatggcacggctcgttgggcggga
tttggcgaaatgcggcacgccggttacctgcagcgctataatcgtatcaaggggccgatc
tttggaaagacgtgtggccctcgttggttcggcagttatctgaccaatggcgaacagcct
cacagtcttgttgtcgcgccaacgcgcgccggcaaaggcgttggcgtcgttattccgacg
ctcctaaccttcaagggttcggtgatagccctcgacgtcaaaggcgagctttttgagctg
acttccagagcacgcaaagcgggcggcgacgccgttttcaagttctcacctctggatcca
gagcgacggactcattgttacaatcccgtcctcgatattgcagctttaccgctcgagcgg
cagtttaccgagacgcgccgcctcgccgcaaacctcatcacggccaaaggcaagggagcg
gaaggctttatcgacggcgcgcgggaccttttcgttgcgggcatccttacctgtattgag
cgcggtacgccaacaattggtgcggtctacgacttatttgctcaacctggagagaagtac
aaactttttgcgcacctcgcggaagaaagccgaaataaagaggctcagcgtattttcgac
aatatggcgggtaacgacacgaaaattttgacttcttatacatcagtgctcggcgacggc
ggacttaacctgtgggctgatccattggttaaagcagcgacaagtcgatcagatttttcc
gtctatgatctgcgtcggaagaggacctgcgtctatctttgcgtcagtcccaacgacctc
gaggtcgtggcgccattgatgcgcctcctttttcagcaggtcgtgtcaattctgcagcga
tcactgccaggtaaagatgagcggcatgaagttttgtttctccttgacgaatttaaacac
ctggggaagcttgaggcaatcgagaccgcgattacaaccatcgccggttacaaaggccgc
ttcatgtttattattcagagtctctcggccttgacgggcacctacgatgacgcgggcaaa
caaaactttctcagtaacactggcgtgcaagtatttatggccacggccgacgacgaaaca
ccgacctatatctcaaaagctatcggcgactatacgttcaaggcgcgttcgacctcatac
agtcaagcccgaatgttcgatcataacatccagatttccgatcagggggcaccgcttttg
cgccccgaacaagtgcgcttgcttgacgataacaatgaaatcgtccttattaaagggcat
ccgcctctcaaactacgaaaggtgcgatattattccgatcgtatgctgaggcgccttttc
gaatgccaaattggcgccctccctgagcccgcatctttgatgctttcggaaggtgtccat
cgggatgggcaagacctcagtcaacatgccgccgtcacggaggcgcagggcttaggtgac
atcgattcgatacctaataatatggaagccgctacaccgcaaaacagtgaaatggatgac
gagcaggacagcctcccaactggaattgacgtcccccagggccttattgaaagcgatgag
gtgaaagaagacgccggtggcgtggtgccagatttcggtgtttcagctgaaatggctcca
gctatgattgcacaacagcagctgctggagcagatcattgcgcttcagcaacgatatgga
cccgcgtcctcgcactcggtgaaatga

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