KEGG   Nitrosomonas europaea: NE0172
Entry
NE0172            CDS       T00130                                 
Symbol
pnp
Name
(GenBank) pnp; polyribonucleotide nucleotidyltransferase protein
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
neu  Nitrosomonas europaea
Pathway
neu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:neu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NE0172 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:neu03019]
    NE0172 (pnp)
   03016 Transfer RNA biogenesis [BR:neu03016]
    NE0172 (pnp)
Enzymes [BR:neu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     NE0172 (pnp)
Messenger RNA biogenesis [BR:neu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NE0172 (pnp)
Transfer RNA biogenesis [BR:neu03016]
 Prokaryotic type
  tRNA degradation factors
   NE0172 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 S1_2 RNase_II_C_S1
Other DBs
NCBI-ProteinID: CAD84083
UniProt: Q82XT0
Position
complement(210838..212964)
AA seq 708 aa
MKPIKKSITYGRHTLTIETGEIAKQAHGAVIVSMDDTVVLVTAVGDKKTKPGQDFFPLTV
DYQEKFYSAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPDGFYNEVQVVAMVLSSD
TEIDADIPAMIGTSAALILSGIPFDGPVGAARVGYINNEYILNPTTTQLKESQLNLVVAG
TQKAVLMVESEADELSEDVMLGAVTYGHDQMQQVIDMINELADEAGVTAWDWQPAEQDLS
LVEKVTQLAEADLRNAFRLKQKSARVEAINEIWQRVFTELKVGTEEGPSEQAVREIGFAL
EARIVRNSILDGESRIDGRGTRTVRPITIRHGVLPRTHGSALFTRGETQALAITTLGTAR
DEQKIDALQGDYSERFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALLAVIPPVEE
FGYSMRVVSEVTESNGSSSMASVCGGCLSLMDAGVPLKAHVAGIAMGLIKEGNRFAVLTD
ILGDEDHLGDMDFKVAGTEHGITALQMDIKIQGITKEIMQVALLQAKEGRLHILEIMKQS
LPIARESISVHAPRIIKFKINPEKIRDVIGKGGAVIRALTEETGTTIDISDDGSVTIACV
SSEGGEQARKRIEDITADVEVGRIYEGTVLKLLDFGAIVSVLPGKDGLLHISQIANERVE
NVADHLKEGQTVRVKVLEADEKGRLRLSMKAASISTEITADNPDNTEK
NT seq 2127 nt   +upstreamnt  +downstreamnt
ttgaagccaataaaaaaaagtataacctacggacgccatacactcaccattgaaaccgga
gaaattgccaaacaggcacatggtgcagtcattgtttccatggatgatacggttgtactg
gtgactgcagtaggcgataaaaaaaccaaacccggacaggatttcttcccgctcaccgta
gattaccaggagaagttttattctgccggccgtattccaggaagttttttcaaacgtgaa
ggccgcccttccgaaaaggaaacactgacctcccggctgatcgatcgaccgatacgcccg
cttttccccgatggcttttataacgaagtacaagtcgttgccatggtgctgtcatccgat
actgaaatcgatgctgacattcctgcaatgatcggtacctcagcagcgctgatactctcg
ggtatccctttcgatggtccggtcggtgcagcgcgggtgggttatatcaataatgaatat
attctcaatccgaccactacccagctcaaggaatctcaactcaatcttgtggtagccggc
acgcagaaagcggtgctgatggttgaatcggaagccgatgagctttctgaagatgtcatg
ctcggtgctgtgacatacgggcatgatcagatgcagcaagtgatcgacatgatcaatgaa
ctggctgatgaagcaggtgtaactgcctgggattggcagccggcagaacaggatttatca
ctggtcgaaaaagttacccaactggctgaagctgatctgcgcaatgcattccggctgaaa
caaaaatcagccagagtcgaagcaatcaatgagatctggcagcgtgtattcaccgagttg
aaagtgggtacagaggaaggccccagtgaacaggcagtcagagaaattggttttgcgctt
gaagccagaatagtacgtaacagtattcttgatggggaatcccggatcgatggtcgtggc
acccgcaccgttcggccaatcactattcgccatggtgtattgccgcgcactcacggttct
gcgctgttcacacggggagaaacacaagcacttgcaatcaccacgctgggaacagcacgc
gatgaacaaaaaatagacgcactccagggagattattccgaacgtttcatgcttcactac
aacatgcctcctttcgccacgggcgaaaccggaagggtaggaacccccaaacggcgtgaa
atcggtcatggacggctggccaagcgtgctctgctggcagtgataccaccagtggaagaa
ttcggttattcgatgcgcgtggtctcggaagtgactgaatcaaacggctccagctcgatg
gcatctgtctgtggtggatgtctttcactcatggatgcaggtgttccactgaaagcacat
gtagccggcatcgccatgggattgatcaaggaaggcaaccggtttgccgtgctgaccgac
attctcggcgacgaagatcacctgggtgatatggatttcaaggtggcgggtaccgaacac
ggcatcactgccctgcaaatggatataaaaattcaggggatcacgaaggaaatcatgcag
gttgctctgctccaggcaaaggaagggcgtctgcatattctggaaatcatgaaacaatct
cttccaattgcaagagaaagtatctcggtccatgctccgcgcatcatcaaattcaagatc
aacccggaaaagatccgtgatgtcatcggtaaaggcggtgcagtgattcgtgcgctaacc
gaagaaaccggaacgaccatcgatatttccgatgatggttccgtgacgattgcctgtgtc
agcagtgaaggtggagaacaagcgagaaaacgtatcgaagatatcactgcagatgtcgaa
gtcggaaggatttacgaaggaactgttctcaaattgcttgattttggcgccattgtcagc
gttcttccggggaaagatggattgctccatatttcccagattgccaatgaacgggtcgaa
aatgttgctgaccatctcaaagaaggacagaccgttcgtgtcaaagtactggaagcagat
gaaaaaggccggctgcgactcagtatgaaagcagccagtatcagcacagaaataactgca
gacaatccggacaacactgaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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