KEGG   Nothobranchius furzeri (turquoise killifish): 107384784
Entry
107384784         CDS       T05163                                 
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
  KO
K15516  fragile X mental retardation protein
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107384784 (fxr2)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107384784 (fxr2)
   Factors involved in mRNA localization
    Other mRNA localization factors
     107384784 (fxr2)
   mRNA cycle factors
    Stress granule specific factors
     107384784 (fxr2)
SSDB
Motif
Pfam: FXMRP1_C_core KH_9 Tudor_FRX1 FXR_C1 KH_1 Agenet DUF1604 DUF150_C
Other DBs
NCBI-GeneID: 107384784
NCBI-ProteinID: XP_015813721
UniProt: A0A1A7Z9J8
Position
sgr10:11500652..11533460
AA seq 673 aa
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNSP
ATRNAFHKVTVAVPEDLREICANDDVHKDFRKAIGANCIFYSAQTHELIVLSTNETTVKR
AALLSDMHFRSIRTKLILMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDHFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTVGSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRPPLNRPGVPGADREKGYQTDD
SSNSLHTSRTYGGRGRGRRASNSQHPAHGTNSEQSNASESEDVIERDQRPRGIGSDERGS
RRGGRGRGTNSGRGRGGSGSKPSNSISSVLRDPDSNPYSLLEGEGELAEGDISDGMGGDR
RRRSRRRRNDQEPSLMDASVESDSPAGPSENGLDEEARPQRRNRSRRRRNRGGRPEGGST
SRERQPAETVTVADYISRAESQSRQNLPQKDNHAEPKENGTSAEKDERTPSKRSPSKGVT
SASESLTLVNGVS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggacgggctcgccgtggaggttcgcggctcgaacggggccttctacaagggttttatc
aaagatgtccacgaagactcgctcacgattgtatttgaaaacaactggcagccagagaga
cagttacccttcagcgacgtacggttgccccctccagccgactaccacaaagacatcggt
gaaggagaggaggtggaggtttactctcgggccaatgaacaggaaccgtgtgggtggtgg
ctggctcgggtcaggatgatgaagggagagttttatgtaatagaatatgcagcgtgtgac
gccacatacaacgagatcgtcacgtcggagcgcatcaggcctctcaatcccaacagcccc
gccactcgaaatgctttccacaaggtcacagtcgccgtcccagaagacctgagggagata
tgtgcgaacgatgacgtccacaaagacttcaggaaagctattggagccaactgcatcttc
tacagcgcccaaacgcacgagctcattgtgctgtctacaaacgagaccacggtgaagcgt
gccgctctcctgagcgacatgcatttccgcagcatccgtaccaaacttatcttaatgtca
cgtaacgaggaagccaccaaacatctggagaccagtaagcagttggcgtcagcgtaccaa
gaggaggtacgagtcagagaagatctcatgggccttgccatcggctcccacggtgccaac
atccaacaggcgaggaaggttccgggtgttacagctatcgagttggaagaggagagctgc
acattcaggatctatggggagactccagaggctgtgaagcaggctcgtgagtacctcgag
ttcaaagaggaccactttcaagtacccaggaacctcgtaggcaaagtcattggtaaaaat
ggcaaagtcattcaggaaatagtggacaagtcaggtgtggttcgcgtcaggattgaagga
gacaacgacaaaaagctgccgcgggaggaggtaggcaggcagggggctggcagggacgac
actgtcggcagcaaagaggggatggttcccttcgtgtttgtgggaactaaagaaaacatc
agtaatgctcaagctctgctggagtaccacgtgtcataccttcaggaggtggagcagctg
cgcctcgagcgtctccagatcgatgagcagctccgtcagattggggttggttaccgacct
cctctaaaccgacccggggtccccggtgctgaccgggagaaaggctaccagacagacgac
agcagcaattcgctccacacgtctcggacctacggcggccgtggccgagggaggagagcc
tccaacagccagcaccccgcacacggaacaaactctgaacagtccaatgcttctgagtct
gaggatgtcatcgagagagaccagagaccccgcggcatcggcagtgatgaaagaggctcc
agacggggcggcaggggccgaggaaccaactcaggtcgtggtcgtggtgggtctggatcc
aagccttccaactccatcagctcggttctgagggaccctgatagcaacccctactctctg
ctggagggagagggagagctggctgaaggagacatcagcgatggtatgggaggagaccgc
cgtagacggtccagacgccgccgcaacgaccaggagcccagcttgatggatgcatctgtg
gagtcagacagcccggctgggcctagtgagaacgggttagatgaagaagcccgacctcag
cgccgcaaccggagccgccgccgccgtaaccgtggcggccgcccagaaggaggttcaacc
agccgtgagagacaaccggcagaaactgtgactgttgctgactacatatctcgtgctgaa
tcccagagcaggcagaacctgcctcagaaagacaaccacgccgaacccaaggagaacggc
accagcgcagagaaggatgagcgaacgccttccaagcgttctcccagcaaaggcgtgacc
tcggccagcgaaagcctgaccttggtcaacggggtctcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system