KEGG   Nothobranchius furzeri (turquoise killifish): 107391737
Entry
107391737         CDS       T05163                                 
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510  Focal adhesion
nfu04520  Adherens junction
nfu04530  Tight junction
nfu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107391737
   04520 Adherens junction
    107391737
   04530 Tight junction
    107391737
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    107391737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nfu04131]
    107391737
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nfu04812]
    107391737
   04147 Exosome [BR:nfu04147]
    107391737
Membrane trafficking [BR:nfu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    107391737
Cytoskeleton proteins [BR:nfu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     107391737
Exosome [BR:nfu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107391737
  Exosomal proteins of colorectal cancer cells
   107391737
  Exosomal proteins of bladder cancer cells
   107391737
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_6 EF-hand_1 EF-hand_7 EF-hand_5 XisI
Other DBs
NCBI-GeneID: 107391737
NCBI-ProteinID: XP_015824658
UniProt: A0A8C6LF64
Position
sgr16:complement(18125680..18200041)
AA seq 912 aa
MDSYDGDGNYMHQEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDG
LKLMLLLEVISGERLAKPERGKMRVHKISNVNKALNFIASKGVKLVCIGAEEIVDGNAKM
TLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCAL
IHRHRPELIDYGKLRKDDPMTNLNTAFEVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYV
SSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRMP
ENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVS
DINNAWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEDLLQKRDY
ETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRICDQ
WDSLGALSQKRNEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTIE
EIQGLSTAHEQFKATLPEADKERMAILGIHNEIAKIVQTYHVNMAGTNPYTTINPQEINA
KWDKVRQLVPQRDQALIEEHARQQNNERLRRQFATQANIIGPWIQNKMQEIGRISIEMHG
TLEDQLTHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLT
TIARTINEIENQILTRDAKGISQEQLNEFRASFNHFDRDHSGTLGAEEFKACLISLGFDI
GNDAQKRTGIMDADDFKTCLISMGYNLGENEFSRIMSIVDPNRMGIVTFQAFIDFMSRET
ADTDTADQVMASFKVLAGDKNYILADELRRELPPDQAEYCIARMAPYTGPDGVPGALDYM
SFSTALYGESDL
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggattcctatgatggagacggtaactacatgcaccaggaagacgactgggatcgggat
atgctcctggatcctgcatgggagaagcagcagagaaagacgtttacagcgtggtgcaac
tctcacctgaggaaagcaggaacgcagatcgagaacatcgaggaagacttccgggatggg
ctgaaactcatgctgctgctggaggtcatctcaggtgaacgcttggccaaaccagagaga
ggcaagatgagggtccataagatctccaacgtgaacaaagcgctcaacttcattgccagt
aaaggagtgaagctggtttgtattggagcagaagaaattgttgatgggaatgctaagatg
accctgggaatgatctggaccatcatcctccgcttcgcaatccaggacatttctgtcgaa
gagacgtctgccaaagagggcctcctgctgtggtgccagaggaagaccgcgccctacaag
aacgtcaacatccagaattttcacatcagctggaaagatggtttgggtttctgcgcgctc
attcatcgacatcgtccagagctcatcgactacggaaagctacgaaaggacgacccgatg
accaacctgaacacggccttcgaagtggcggagaagtatctggacatccctaaaatgttg
gacgcagaagatattgtaggcactgcccgtccagacgagaaggccatcatgacctacgtc
tctagcttctaccatgccttctcaggagcgcagaaggcggagacggcagcaaacaggatc
tgcaaggtgctggccgtcaatcaggagaatgagcagctgatggaggactatgagaagctg
gccagtgacctgctggagtggatccgtcgtaccatcccctggctggagaacagaatgccc
gagaacaccatgcaggccatgcagcagaagctggaggacttcagagactaccgacgcctc
cacaagccgcccaaagttcaggagaagtgccagctggagatcaacttcaacacgcttcag
accaaactgagactcagcaacaggcccgccttcatgccctcagagggaaaaatggtctcg
gacattaacaacgcctggggaaacctggagggagcagagaagggctacgaagagtggctc
ctcaacgagattcgcaggctggagagactcgaccacctagctgagaaattccgccagaaa
gcggcgattcacgaagcctggaccgaaggtaaggaggacttgctgcagaagcgggactac
gagacggcctctctgtcggagatcaaggccctgctgaagaaacacgaggcctttgagagc
gacctggctgcacatcaggaccgcgtggagcagattgcagctattgcccaggagttaaac
gagctggactactacgactcccccagcgttaacgctcgctgccagaggatctgcgatcaa
tgggactcactgggagctctgtcccagaaacgcaacgaggctctgcagagaactgagaag
ctgcttgaaaccatcgaccaactgtaccttgagtttgccaaaagagcagctccattcaac
aactggatggagggcgccatggaggacctgcaggacaccttcatcgtccacaccatagag
gaaatccagggactgagcacagcccacgagcagttcaaagccacactgccagaggctgat
aaagagcgcatggccatcctgggcattcacaacgagatagctaaaattgtgcagacttac
catgtgaacatggccggcaccaacccctacaccaccatcaacccacaggagattaatgcc
aaatgggacaaggtgaggcagctggtgcctcagcgcgaccaagctctgatcgaagaacac
gcccggcagcagaacaacgagcgtctgcgcaggcagtttgccacccaggccaacatcatc
gggccctggatccagaacaagatgcaggaaattggccgcatctccatcgagatgcacggt
accctggaggaccagctgacgcacctccgccagtacgagaaaagcatcgtcaactacaag
ccaaagatcgaccagctggagggagaccaccagcttatccaggaagctctcatcttcgac
aacaagcacaccaactacaccatggagcacatccgtgtgggctgggagcagttactcacc
accatcgcccgtaccatcaatgaaattgagaaccagatcttgacgcgagacgccaaaggc
atcagccaggagcagctgaatgagttccgggcttccttcaaccattttgacagggaccat
tcgggcactctaggcgcggaagaattcaaggcctgcctgatcagcctgggcttcgatatc
ggcaacgatgcacagaagagaacaggaatcatggatgctgatgacttcaaaacctgcctt
atctccatgggttacaacctgggtgagaatgaattctcccgcatcatgagcatagtggat
cccaacagaatgggaattgtcaccttccaggcctttatagacttcatgtcccgcgaaacg
gctgacacggacacagcagaccaggtcatggcgtccttcaaagtacttgctggggacaag
aactacatcttagctgatgaacttcgtcgggagcttcctccggaccaggctgagtactgc
atcgcccgcatggccccttacaccgggcccgatggcgtccccggggcccttgactacatg
tccttctccaccgctttgtatggcgagagtgacctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (62)   

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