KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103736795
Entry
103736795         CDS       T03372                                 
Symbol
Scn11a
Name
(RefSeq) sodium voltage-gated channel alpha subunit 11
  KO
K04843  voltage-gated sodium channel type XI alpha
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ngi04040]
    103736795 (Scn11a)
Ion channels [BR:ngi04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   103736795 (Scn11a)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel GPHH
Other DBs
NCBI-GeneID: 103736795
NCBI-ProteinID: XP_008834558
Position
Un
AA seq 1727 aa
MEDRYYPMIFPDERNFRPFTSDSLAAIEKRLAIQKEKKKSKDKTVVEPHPRPQLDLKASR
KLPKLYGDIPRELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSARRALFVLGPFNPVRS
LAIRISVHSLFSMFIICTVIINCGFMAHNGNKNSDTDVAELIFTGIYILEALIKILARGF
ILDEFSFLRDPWNWLDFVVIGTAIATYSPGTKINLSALRSFRVFRALKAISVVSGLKVIV
GALLRSVKKLVDVMVLTLFCLSIFALVGQQLFMGTLNQKCVKKNCGPNPLSNEYCFEREN
NSKEFIMCGNWFGSRPCPYNSECRNTSFNPDYNYTSFDNFGWSFLAMFRLMTQDSWEKLY
QQTLRTSGPYSVFFFVIVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKERMFQEAQ
QLLKEEKEALVAMGIDRSSLNSLQASSFSPKKRKFFGNKTRKSFFMRGSKKDQTSGSDTD
EESSKNPQLLEQTKRLSQNLPVDLFDDHVDSFHRQRALSAVSILTITMQEQEKSQEPCLP
CGENLASKYLVWDCSPQWLCIKKVLRIIMTDPFTELAITICIIINTVFLAMEHYNMDKNF
SSVLRTGNWVFTGIFIAEMCLKILALDPYEYFRHGWNIFDSIVALLSLADVLYHLSHPNS
RSFLASFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVIFIFSVVGMQLFGS
RFCSQKIKNPCAAEESCRRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEMEGSPLCII
VFVLIMVIGKLVVLNLFIALLLNSFSNEERDGNPEGQTRKTKVQLALDRFCQAFSLVVHT
LENFCCKRYRRQNATKQKEISGSSAAENKDILLDTEPWKKFDAQKSSDPGQDGVQLAPLA
EEEDDTEYSDEFDVLPTSQPEVQVCDLHQETKAPTSPDDQGVEIDVFSDDDTYLTIQSFR
KKSDAASVLSECSTIDLQDIFRHLQRTVPQKKQPERCLPKGISCRFLCQKWDRKKSPWAI
WWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVYLPSRTHIKNLLNCTDNIFTFIF
ILEMILKWVAFGFRKYFTSAWCWLDFFIVIVSVVSLLNLKSLKSFRTLRALRPLRALSQF
EGMKVVVNALISAIPAILNVLLVCLIFWLIFCILGVYLFSGKFGRCVNGTDINKYMNHTI
ISNKNQCEFSNYSWKTPSVNFDNVGNAYLALLQVATYKGWLEIMNAAVDSTEIDNFNQQQ
KKISGQDIFMTEEQKKYYNAMKKLGTKKPQKPIPRPLNKCQGLVFDLVTNQVFDIFIMGL
IILNMIIMMAEYNGQPDEEKKIFDYLNIAFVVIFTLECLIKIFALRQYYFTNGWNLFDCV
VVVLSIISTMVSVLEKSEIPFPPTLFRIIRLARIGRILRLVRAARGIRTLLFALMMSLPS
LFNIGLLLFLVMFIYAIFGMSCFSKKVDQVSGIDDIFNFQTFSGSMLCLFQITTSAGWDA
LLKPMLESNTSPSSDSCQRPSIAIVYFVSYIIISFLIVVNMYIAVILENFNTATEESEDP
LGEDDFDIFYEIWEKFDPEATQFIKYSSLSDFADALPEPLRVAKPNKFQFLVMDLPMVID
DRLHCMDVLFAFTTRVLGNSSGLDTMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEELCA
AIIQRAYRKHMEMIKLKLKDQLSSSLPTFCNGDLSSSEVAKVKVHYD
NT seq 5184 nt   +upstreamnt  +downstreamnt
atggaggacaggtactacccaatgatcttcccagatgagcggaatttccgtcccttcact
tctgactctctggccgccattgagaagcggcttgccatccagaaggagaaaaagaagtcc
aaagacaagacagtagtcgagccccatcctcggccacagctggacctaaaggcctccagg
aagttaccaaagctttatggagacattccccgagagctgatagcaaagcctctggaagac
ttggaccccttctacagaaaccataagacatttatggtgctgaacaagaagagaacgatc
tatcgcttcagtgccagacgggccttgtttgttctggggcctttcaatccagtcaggagt
ttagccattagaatctcggtccattcgctgtttagcatgttcatcatttgcaccgtgatt
atcaactgtgggttcatggctcataatgggaacaaaaattcagacacagacgttgctgaa
ttaatcttcactgggatttatattttagaagctttgattaaaatattagcaagaggtttc
atcctggatgagttttccttccttcgagatccgtggaactggctggacttcgttgtcatt
ggaacagcgattgcaacttattctccaggtaccaaaatcaatctgtcagctctgcgttcc
ttccgagtgttcagagctttgaaagctatttcggttgtttcaggtctgaaagttattgtg
ggggccttgctgcgctctgtgaagaagctagtggatgtgatggtccttaccctcttttgc
ctcagcatttttgccctggtaggtcagcagctcttcatgggaaccctgaaccagaaatgt
gtcaagaaaaattgtggtcctaaccctttatctaacgagtattgctttgaaagggaaaac
aattccaaagagttcataatgtgtggcaactggtttggcagcagaccctgtccttataat
tctgagtgcaggaacaccagttttaatccagactataattacacaagttttgacaacttt
ggctggtcttttcttgccatgttccggcttatgactcaagattcctgggagaaactgtac
caacagactctgcggacatctgggccctactcagtcttcttttttgtgatagtcatcttc
ctgggctctttctacttgattaacttaactctggctgtcgtcaccatggcctatgaagag
caaaacaggaatgtagctgcggagacagaggccaaggagaggatgtttcaggaagcccaa
cagctattaaaggaggagaaagaggctctggttgccatgggaattgacagaagttcactt
aattcccttcaagcatcatccttttccccaaagaaaagaaagttttttggtaataagaca
agaaagtccttctttatgagaggatctaagaaagaccaaacttcaggatccgatacagat
gaagagtcctctaaaaatccacaactcctcgaacaaaccaaaagattgtcccagaacctt
ccagtggacctctttgatgatcacgtagactctttccacaggcagagggcactgagtgct
gtcagcatcctgaccatcaccatgcaggaacaagaaaaatctcaggagccttgtctccca
tgtggggaaaacctagcatccaagtatctggtgtgggactgtagcccccagtggctgtgc
ataaagaaggttctgaggattataatgactgacccttttactgaactggccatcaccatc
tgcatcataatcaacactgtcttcctagccatggaacactacaatatggataaaaatttt
agttccgtactgagaacaggaaattgggttttcacgggcatttttatagcagaaatgtgc
ctaaaaatccttgccctggacccttacgagtactttcgccacggctggaatatttttgac
agcatcgttgcccttctgagcctcgcagatgtgctgtaccacctgtctcacccaaacagt
cggtcattcttggcttccttcagagtgctgagggtcttcaagttagccaaatcctggcca
acattaaacaccctaattaagatcatcggccactccgttggagcgcttggaaacctgacc
gtggtcctgaccattgtgattttcatcttttcagtcgttggcatgcagctttttggctct
aggttctgttctcaaaagattaaaaatccctgtgctgcagaggagtcatgtcgccggcgc
tggcacatgggggatttctatcactccttcctggtggtgttccgcatcctctgcggggaa
tggatcgagaacatgtgggaatgcatgcaggagatggaggggtctccactgtgcatcatt
gtctttgtgttgatcatggtgataggaaaacttgtggtgctcaacctgttcattgccttg
ctgctcaattccttcagcaatgaagagagagatggaaacccagaaggacagaccaggaaa
accaaagtccagctggccctggatcggttctgccaggctttttctcttgtagtacacact
cttgagaatttctgttgcaagagatataggagacaaaacgcaacaaagcaaaaagagatc
tcaggaagctctgctgcagagaacaaagatattcttctggacacagagccctggaagaaa
tttgatgcccaaaagagctcggacccaggccaagatggggttcagttggccccacttgcg
gaagaagaggatgacactgaatattctgatgaatttgatgtcctgcccacctcacaacct
gaagttcaggtctgtgacctccatcaagagaccaaggcgcccaccagcccagatgatcaa
ggtgtggaaattgatgtgttttctgatgatgacacctatttaaccatacagagtttcaga
aagaagtctgatgctgcaagtgtgctctcagaatgcagcacgattgacctgcaggacatc
ttcaggcatttacagagaacggtcccacaaaagaagcagccagagagatgcttgcctaaa
ggcatcagttgtcgctttctctgccaaaagtgggacaggaaaaagtccccctgggccatt
tggtggaatttgcggaaaacctgttaccaaatcgtgaagcacagctggtttgagagcttc
atcatctttgtgatcctgctgagcagtggggcactgatatttgaagatgtttatcttcct
agtcggactcatatcaaaaacttactaaactgtactgacaacattttcaccttcattttc
attctggagatgattctgaaatgggtggccttcggatttaggaagtatttcaccagtgcc
tggtgctggcttgatttcttcattgtaattgtgtctgttgtcagtctcttgaatctaaag
agcttgaagtccttccgcactctgcgagcactgaggcctctgcgggcactgtctcagttt
gaaggaatgaaggtggtggtgaatgctctcatcagtgccatacctgccattctgaacgtc
ttgctggtctgtctcattttctggctcatattttgcatcctgggagtatatttattttct
ggaaagtttggaagatgtgttaatgggacagatataaataaatatatgaatcataccatc
atttcaaacaaaaaccaatgtgaatttagcaattattcctggaaaaccccaagcgtcaac
tttgacaacgtggggaatgcttaccttgctctgctacaagtggcaacatataaaggctgg
ctggagattatgaatgcagctgttgattccacagagattgacaacttcaaccaacagcag
aaaaagataagtggccaggacatttttatgacagaagaacagaagaaatactataatgca
atgaaaaaattaggaaccaaaaaacctcaaaaacccatcccaaggcctctgaacaaatgt
caaggccttgtattcgacctggtcacgaatcaggtgtttgacatcttcatcatgggtctc
attatcctaaacatgatcatcatgatggctgaatataatggccagcctgacgaagagaaa
aaaatctttgattatctcaacatagcctttgtggtcatctttacactagagtgtctcatc
aaaatctttgctttgaggcagtactacttcaccaatggctggaatttatttgattgtgtg
gtcgtggtcctttccatcattagtaccatggtttctgtgttggagaaaagcgaaattcct
ttcccaccaactctcttcagaatcatccgcttggcccggattggccgaatcctcagactt
gttcgagcagcacgaggcatcaggaccctcctctttgctctgatgatgtcccttccctct
ctattcaatattggtctgcttctctttctggttatgttcatttatgccatctttgggatg
agctgtttttccaaaaaggttgatcaagtttctggaatcgatgacatctttaacttccag
actttttccggcagcatgctctgtctcttccagataaccacttcagctggctgggatgct
ctcctcaagcccatgctggagtcgaacacctcccctagctcagacagctgtcagcggccg
agtatagccatagtttacttcgttagctacatcatcatctcttttctcatcgtggtcaat
atgtacattgctgtgatcttagagaacttcaataccgccacggaagaaagcgaggaccct
ttgggtgaagatgactttgatatattctacgaaatctgggaaaagtttgaccctgaagca
acacagtttatcaaatattcttccctttctgattttgctgatgccctgcctgagcctttg
cgtgtggcaaaacccaacaagttccaatttctagtaatggacttgcccatggtgattgat
gaccgcctccactgcatggatgtcctctttgcctttaccactagggtacttggtaactcc
agtggcctggataccatgaaagcgatgatggaggagaagttcatggaagccaatcccttc
aagaagttgtacgaacccatagtcaccaccacgaagaggaaggaagaggagctgtgtgct
gcgattattcagagggcctatcgcaaacacatggagatgatcaagttgaagttgaaagac
cagttaagttcatcactcccgacattttgcaatggagatttgtctagctctgaggtagct
aaagtcaaggttcattatgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (61)   

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