KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103741766
Entry
103741766         CDS       T03372                                 
Symbol
Dhx40
Name
(RefSeq) DEAH-box helicase 40
  KO
K18711  ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngi03019]
    103741766 (Dhx40)
Enzymes [BR:ngi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103741766 (Dhx40)
Messenger RNA biogenesis [BR:ngi03019]
 Eukaryotic type
  mRNA processing factors
   Other processing factors
    103741766 (Dhx40)
SSDB
Motif
Pfam: OB_NTP_bind DEAD Helicase_C HA2_C AAA_22 HA2_N T2SSE SLFN-g3_helicase AAA_19 DUF4685 nSTAND3 AAA_30 Flavi_DEAD ResIII PhoH Helicase_RecD
Other DBs
NCBI-GeneID: 103741766
NCBI-ProteinID: XP_017656001
UniProt: A0A8C6R3B9
Position
Un
AA seq 779 aa
MSRFPAVAGRAPRRQEEGERPGELQEERPSAVCIADREEKGCTSQEGGTTPTFPIQKQRK
KLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAE
EMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTL
TTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREK
FCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVD
YDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYV
VDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPD
HVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRNGHVT
RLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRH
RELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKL
KQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHE
QETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVVRREVREDAR
RKWTNKENMEQLKDGISKEVLKKMQRRNDDKSISDARARFLERKQQRIQDHSDTLKETG
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtcccggtttcccgccgtcgcgggcagggcgccaaggcggcaggaggagggcgagcgg
cctggagagctccaggaggagcggccgtcggctgtttgcatcgctgacagagaagagaaa
ggatgcacatcacaggagggaggaactactccaacttttcctattcagaagcaaagaaaa
aagcttatccaagctgtgagggacaattcattccttattgttactggaaatacaggaagt
ggtaaaacaactcagctcccaaaatacctttatgaagcagggttttcccaacatggtatg
attggtgtcactcagccacgaaaagtagctgccatatcagttgctcaaagggttgctgaa
gaaatgaaatgcactttgggatctaaagtagggtaccaagttcgctttgatgattgtagc
tcgaaggaaacagcaatcaaatacatgactgatgggtgtttactgaagcatattctggga
gatccaaatcttaacaaattcagtgtcattatcttggatgaagcccatgaaagaactcta
actacagatattttatttggtttattgaagaagctatttcaggagaagtctcctaacaga
aaggagcatttaaaagttgtggtaatgtcagcaactatggagttagccaagctctctgca
ttctttgggaattgtccaatatttgatatacctggaagactttatccagtcagagagaaa
ttctgcaatttgattggcccaagagacagagaaaacactgcatatattcaagcgattgtg
aaagtgaccatggatattcatttgaatgaaatggctggagacatcttagttttcctcact
ggccagtttgaaatagaaaaaagttgtgagctgctttttcaaatggcagagtctgttgac
tatgattatgatgtacaagataccaccctagatggcttattgatactgccatgctatgga
tccatgacaacagaccaacagaggagaatatttttgccacctccacctggaattagaaaa
tgtgtcatatctaccaatatttctgcaacatctttgacaatagatgggatcagatatgtg
gtagatggtggctttgtgaagcagttaaatcacaaccccagattaggattggacatcctg
gaggtagttcctatttcaaagagtgaagcattacagcgaagtggccgagctggcaggact
gcctctggaaaatgttttcggatttacagtaaagatttttggaaccagtgcatgcctgat
cacgtgatccctgaaattaagagaactagtttgacatctgtagttctaaccttaaagtgc
cttgccatacatgatgtcataaggtttccctatttggatccacctaatgagagacttatt
ttagaagcacttaaacaactttaccagtgtgatgctattgacaggaatggccatgtgaca
agattgggtttatctatggtggagtttcctctccctccacatctgacatgtgcagtaatc
aaggctgcttctcttgattgtgaagatttactgcttccgatagcagcaatgttatccgtg
gaaaatgtcttcatcagacctgttgatccagagtaccagaaggaagcagaacagagacat
cgagaattggcagcaaaagctggaggatttaatgattttgcaactttagctgtcatcttt
gaacagtgcaaatcaagtggagctccagcttcatggtgccaaaaacattggattcattgg
aggtgcttgttttctgcatttcgagtggaagctcaacttcgagaactaatcaggaaactt
aaacagcaaagtgacttcccaagagagacttttgaaggccctaaacatgaagtactacga
cgatgtctttgtgcaggctacttcaaaaatgttgctcgaaggtctgttggaagaaccttt
tgcacaatggatgggcgtggaagcccagttcatattcatccttcctcagcacttcatgaa
caggaaaccaaacttgaatggattatttttcatgaagtattagttaccaccaaagtctat
gcaagaattgtgtgtccaatccgttatgaatgggtgagagacttactacccaagttgcat
gaacttaatgcacatgatctgagcagtgtggttcggcgtgaagtgagagaagatgcaaga
aggaaatggacaaataaggaaaatatggaacagctaaaggatggaatatcaaaagaagtt
ctaaagaaaatgcagagaagaaatgatgacaaatcaatatcagatgcacgggctcgtttc
cttgagagaaaacaacagagaatccaggaccacagtgacacactgaaggaaacaggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (40)   

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