KEGG   Candidatus Nanopelagicus hibericus: B1s21160_03905
Entry
B1s21160_03905    CDS       T05090                                 
Name
(GenBank) signal recognition particle subunit SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nhi  Candidatus Nanopelagicus hibericus
Pathway
nhi02024  Quorum sensing
nhi03060  Protein export
nhi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nhi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    B1s21160_03905
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    B1s21160_03905
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B1s21160_03905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nhi02044]
    B1s21160_03905
Enzymes [BR:nhi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     B1s21160_03905
Secretion system [BR:nhi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   B1s21160_03905
  Eukaryotic Sec-SRP protein
   B1s21160_03905
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N nSTAND3 Zeta_toxin AAA_16 CLP1_P APS_kinase cobW AAA_22 MMR_HSR1 CbiA AAA_30 AAA_18 TsaE AAA KAP_NTPase 6PF2K
Other DBs
NCBI-ProteinID: ASY13465
UniProt: A0A249K9Q9
Position
complement(756543..757976)
AA seq 477 aa
MFEALGQRFSTVFSGLRGKVTQPQLVEFAQDIKLALLDSDVALAVADNFSAKILEKFQEK
SDEINRSTNPSQKIFEIVNNQLTLTLGGNTRRVRYAKTAPTVILLTGLQGAGKTSLAGKL
ANYFKSEGNTPLLVAADLQRPNAVTQLQVVGQSIKIPVFAPEPGNGVGDPVEVARAGLRF
ATEKLHNFVIIDTAGRTGIDEEMMQQVTNVRNAVNPDEVFFVVDAMIGQDAAFTAKAFAQ
GVGFDAIVLTKLDGDARGGAALSVVELTGKPIIFTSTGEKINDFEPFYPERMSSRILGLG
DVASLAEQAKRAMPEDSSKKLEEKFVKGEDFTFEDFLSQLEAMKNMGSISKLMSLLPGAT
GMKKQIENFDESELVRSRAIIESMTPLERRNPKILNGSRRARIAQGSGRAISEINSLVER
FSQAQKMMKQMRGKNPAAGLPSFAGIGGGQVPQNKIEIPKKKSRSGNPAKRALEEGK
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgttcgaagcgttaggccagagattttctacagtattttctggcctacgtggcaaagtc
acacaaccacaattagttgaattcgcccaggatataaaattagctctattagactctgat
gttgctcttgcggtggctgataatttctctgccaaaatcctagagaaatttcaagagaaa
agcgatgaaataaatagaagcacaaatccatcgcagaaaatatttgaaatcgtcaacaat
caattaaccctgaccttaggcggaaatactcgcagagttaggtacgccaaaactgcacca
acggtaattttattaactggcttgcaaggtgccggaaaaacatcattggcgggaaaattg
gcaaactacttcaagagtgaaggaaatacaccactacttgtggcagctgacctgcagcgg
ccaaacgcggtaactcaacttcaagttgttggtcaatcaatcaaaattcctgtttttgct
ccagagcctggaaatggagtgggtgatccagttgaggtggctcgggcaggtctgagattc
gctaccgaaaagctgcacaacttcgtgattattgatactgcaggtcgcaccggaatcgat
gaagagatgatgcaacaagtaacaaatgtgcgaaatgcagtaaatccagatgaggtgttt
tttgttgttgacgcaatgatcggtcaggatgccgcctttactgcaaaagcatttgcccaa
ggggtcggtttcgatgccatagtgctaaccaagcttgatggtgatgccaggggcggcgct
gcactttcagtagttgaattaacaggtaagccaataatttttacctcaaccggtgaaaaa
ataaatgattttgagcctttttatccagaacgaatgtcatctcggattctggggctagga
gatgtggcatccctagcagagcaggcaaagcgagccatgccagaggattcttcaaagaaa
ttagaagagaagtttgttaagggtgaagatttcaccttcgaagattttctctctcaactt
gaggcaatgaaaaatatgggcagcataagcaaattgatgagtttactacccggtgctact
ggaatgaaaaagcaaatagaaaattttgatgaatcagaattagttaggagtagggcaatc
attgaatctatgacgccgcttgaacgccgaaatcctaaaattctaaatggttctaggcga
gcccgtatagcgcaaggcagcggtcgcgcaatctcagaaatcaactctttggttgagcgg
tttagccaagcacaaaaaatgatgaaacaaatgagaggtaaaaatcctgctgcaggattg
ccaagttttgccggtataggtggtgggcaagtgccacaaaataagattgaaattccaaag
aaaaagtcccgctcaggtaaccctgctaaacgggcgttggaagagggaaagtaa

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