KEGG   Nitratiruptor sp. SB155-2: NIS_1473
Entry
NIS_1473          CDS       T00565                                 
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
nis  Nitratiruptor sp. SB155-2
Pathway
nis03420  Nucleotide excision repair
nis03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NIS_1473
   03430 Mismatch repair
    NIS_1473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nis03400]
    NIS_1473
Enzymes [BR:nis01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NIS_1473
DNA repair and recombination proteins [BR:nis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NIS_1473
   MMR (mismatch excision repair)
    Other MMR factors
     NIS_1473
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 PcrA_UvrD_tudor HHH_5 DUF4252 CarD_TRCF_RID AAA_11
Other DBs
NCBI-ProteinID: BAF70580
UniProt: A6Q521
Position
1498585..1500630
AA seq 681 aa
MEKILEDLNEAQREAAQTVDGPILILAGAGSGKTKTITTRLAYLISLGIDPASILTLTFT
NKAAKEMRERALSMLDSALYPPLLCTFHKFGLLFLKFHIDKLDRDNNFVIIDTDDKKRII
KSFKPDLPVSLVASEISKYKNSLITPEEAIASARLPNFKKISSLYKRYQDYLLENNLVDF
DDLLVLTYTILDQDKELCETISNKYQFIMIDEYQDTNELQNRLVQKLCSQHNNICVVGDD
DQSIYGWRGANVKNILEFPNQFDNVKIIKLENNYRSTKKILEAANNLIQHNRNRLGKKLV
STMDDGQDIEILALHDEQEEALEIGKRIQKLIDAGVRPSEIAVLFRINALSRSIEEAFNK
LKINFKLVGAIRFYERAEVKDIISYLRIITNPCDEFSLKRIINRPKRGIGKATYEKLLQK
ANEKDECILEMLLHTSEEDLAQIIGKKSAKTILAFLHNLKYLKELSEESLYNFLEEFDRT
LGIKEYYRALPDGLERVANIDEFYGMFRDYIKQNPQNSLDDFINDISLQSDQDQIGGEAV
SIMSVHASKGLEFEHLFVIGMEEGFFPLTGDGCDIEEERRLGYVAITRAKRGLVLSHVKS
RFYKGRRAYLEKSRFLGEAGLCKSSIKIEKSVGFKKGDLVKHKIFGIGRVIGVSKAGREF
KLTINFSGQQRDILSSFVERA
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggagaaaattttagaagatctcaacgaagcacaaagggaagccgcacaaacagtagac
ggtcccatactgatattagcgggagcagggagcggaaaaacgaaaacgataacgacgcgg
ctcgcttatctcatcagtctaggtatcgacccggcttccatcctcactctaacatttacc
aacaaagcggcaaaagagatgagagagcgggctctgtcgatgctcgattcggccctttat
cctcctttactttgtacatttcataaatttggtctactttttttaaaatttcacatcgac
aaactggatcgagacaacaacttcgtcatcatcgatacggatgacaaaaaaagaatcatc
aaatctttcaaaccagatctccccgtctccttagtcgcaagcgaaatctcgaaatacaaa
aattcccttatcactccggaagaggccatagcaagtgcgagacttccaaactttaaaaaa
atttccagtctttataaaaggtatcaagactacctattggaaaacaatcttgtggatttc
gatgatcttttggtactgacctatactattttagatcaagataaagagctttgcgaaaca
atcagcaacaaatatcagttcatcatgatcgacgagtatcaagatacgaatgaactgcaa
aacagactggtacaaaaactttgcagccaacacaacaatatctgcgtcgtgggagatgat
gaccaaagcatttatggatggcggggcgccaatgtcaaaaatattttggagtttccaaat
caatttgacaatgtcaaaatcatcaaactggaaaacaactatcgatccaccaaaaagatc
cttgaagcggccaacaatttaattcagcacaacagaaacagactcggcaaaaaacttgtc
tccaccatggatgatggtcaagatatcgaaatattggcattgcatgacgaacaagaagaa
gcactggaaataggcaaaagaatacaaaaactcatagatgcaggagtaagacccagtgaa
atcgccgtactttttcgtatcaatgcactctcgcgctccatcgaagaggctttcaataaa
ctcaaaatcaactttaaactcgtcggagccatccgattctatgaacgggcggaagtgaaa
gatatcattagctaccttcgtattatcaccaatccgtgcgacgagttttccctcaaacgc
atcatcaataggccaaaacggggtatcggaaaagctacttacgaaaagcttttacaaaaa
gcgaatgagaaggatgaatgtatcttggagatgctcttgcatacaagtgaagaagatcta
gcccaaatcatcgggaaaaagagtgcgaaaaccattcttgcattccttcacaatctcaaa
tatctcaaagaactcagcgaagagagtctttataactttctggaggaattcgacaggact
ctcggtatcaaagagtactatcgagcactgcctgacggcttggaaagagttgcaaatata
gacgaattttacggaatgtttcgtgactacatcaaacagaatcctcaaaactctcttgat
gatttcatcaacgatatctctttacagtcggaccaagaccaaataggcggtgaagccgtc
tccatcatgagcgttcatgccagcaaagggcttgaatttgaacatcttttcgtcatcgga
atggaagagggatttttccctctaaccggtgatggctgcgacatcgaagaggagcgtaga
ctaggatacgtggctattacaagagccaaaagaggtcttgtcctctcccatgtaaaaagc
agattttacaaaggacgaagagcgtatctggagaaaagtagatttttgggtgaagcaggt
ctatgcaaatcaagtatcaaaatagaaaaaagcgttggatttaaaaagggcgatcttgtc
aaacataaaatatttggcataggacgtgtcattggagtcagcaaagctggacgggaattt
aaactcactatcaacttttccggccagcagcgcgatattttaagctctttcgtggagcgg
gcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (44)   

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