KEGG   Numida meleagris (helmeted guineafowl): 110407460
Entry
110407460         CDS       T06015                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel04510  Focal adhesion
nmel04512  ECM-receptor interaction
nmel04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110407460 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110407460 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110407460 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nmel04147]
    110407460 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:nmel00536]
    110407460 (COL4A2)
Exosome [BR:nmel04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   110407460 (COL4A2)
Glycosaminoglycan binding proteins [BR:nmel00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110407460 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 110407460
NCBI-ProteinID: XP_021270876
Position
1:136719517..136857972
AA seq 1718 aa
MPPELIMPPWVRGDVMDHRRLPSIGRRGKKDFIIFFLKGGKSYTGPCGGRDCSGGCQCFP
EKGGRGQPGLLGSQGFPGPPGLMGIPGLQGPKGHKGERGHPGISGPKGETGQRGVTGFPG
ADGVPGHPGQPGSRGKPGHDGCNGTVGDPGDPGTPGHSGFPGTIGVQGPKGQKGEPYVLP
PDIASRHRGEPGDPGFSGFPGPPGTLGIQGPIGPRGVPGRPGPPGPPGPQGPQGNRGLGF
YGEKGEQGSPGPPGPPGLPTRELIGVPTDKHKGERGDPGQKGEAGFPGVLLFAPEKGEEG
VMGFPGQRGLPGNDGFPGLSGERGFPGFDGQPGQYGPRGGKGEQGEMGPPGPPAYVPYRI
PRKGVRGDPGFPGASGLQGDPGEQGDRGLPGIPGYSDGDADKPGLPGEIGPKGEKGEEGS
PAYQAGPPGFPGKHGEPGLRGPPGPPGTPGSLFGLKGQEGTPGRPGAQGFPGPRGQRGPK
GEEGDCSKCLLSDELRRGSTGPRGPPGFPGTAGQPGRKGEPGDQGPHGIPGYAGAKGQLG
QEGFPGPKGEKGEPVYITTKGAKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDGI
RGLPGDPGYPGELGPKGFPGETGQPGGGFPGPKGYRGPPGDPGTDGNPGSPGLPGLPGEP
GQLDCGQVIEDFSRGDATDPIWSGGGCVRPPKGSQGKPGLPGATGTKGARGFPGDPGPVG
FPGLNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLMGKSGAPGQPGQKGAPG
EVLGAAAGPQGDAGLPGFPGLKGAPGDQGIPGIRGADGNPGLPGPKGDPGLQGLPGLMGL
PGAPGTHGFPGPPGNPGPDGGPGSQGPLGPPGARGEDGEQGFPGQGGIKGPSGDKGETGF
PGLQGIRGVIGPPGIRGMDGFPGDKGSRGSPGIDGFKGMPGLKGRPGIKGIKGDFGLFGT
RGDKGAQGARGFKGDRGEQGPPGEPPKLKPSMMLEVKGEKGDAGETGTKGFFGIKGSKGM
PGLPGKTGIPGSPGHPSFVPGVKGDIGAKGLTGVKGYPGPTGSPGIRGFPGSTGGRGDKG
APGISGHFGTPGSHGEIGEPGDTINLPGMPGLKGEVGVPGLTGLRGGPGQKGEGGDPGLP
GIEGLKGIQGVPGSLGQQGLPGLVGPPGQQGSPGTPGFQGEKGAPGWPGLPGQAGLPGSR
GISGLHGLPGTKGLPGSPGPDGYGSAGFPGPVGDKGEAGEPSRVEGSQGPPGQKGDRGVP
GVQGPFGIPGQDGLPGLPGISNISGYPGDTGSPGLDGVPGYPGLHGQPGIPAPPGSKGES
GRAGVSGQAGPKGARGDPGLPGTPGIPGYPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPK
GDRGLTGSQGPPGSPGLPPLPPRLVAEQGSPGPRGNAGPQGSPGDTGPQGPPGEPGFRGS
PGEPGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSIGYLLV
KHSQSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGD
ICYYANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEASIPRCP
EGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYS
FWLTTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq 5157 nt   +upstreamnt  +downstreamnt
atgcctcctgagctcatcatgcctccctgggtcagaggagatgtcatggaccacaggcgc
cttccatcaatagggagacgtggaaagaaagacttcattatttttttcctgaagggtgga
aagagttacacaggaccatgcggaggaagagactgcagtggaggatgtcagtgtttccct
gaaaaaggaggccgtggccagccaggactccttggatctcaggggttccctgggccacca
ggattgatggggatcccaggactgcaaggtcctaaaggtcacaaaggtgaaagaggacat
ccaggaataagtgggcccaaaggagaaacggggcaaagaggagttactggtttcccaggg
gcagatggcgttcctggtcatccagggcagccgggatcaagggggaagccaggtcatgat
ggctgtaatgggacagtaggtgacccaggtgacccaggaacaccaggacactctggtttc
cctggtaccattggagttcaaggaccaaagggccagaagggggagccctatgtactgcca
ccagacattgccagccgacatcggggggagcctggggatccaggattcagtggttttccg
ggacctcccggtacactgggtattcaaggacctattggtccaagaggagtgccaggaaga
ccaggaccaccagggcccccaggaccacaaggaccacaaggcaacagaggccttggcttc
tatggagaaaaaggtgaacagggctccccaggtcctccaggtccacccgggcttcccaca
agagaactgatcggtgtccccactgacaaacacaagggggaaagaggagaccctggacaa
aaaggagaagctggatttccaggtgtacttctttttgctcctgaaaaaggtgaagaaggg
gtaatgggcttcccaggacaaaggggactgcctggtaacgatggttttccaggactcagt
ggagaaagaggttttccaggatttgatggtcaaccgggtcagtatggtcctagaggaggc
aagggggagcagggcgagatgggtcctccaggaccacctgcctatgttccttaccgcatt
ccaagaaaaggtgtaagaggtgatccaggctttccaggcgcttctggactacagggagat
ccaggagagcagggtgatcgtgggctgcctggtattccaggatactctgatggagacgca
gataagccaggcttacctggagaaataggaccaaaaggtgaaaaaggtgaagaaggatct
cctgcttatcaagcaggcccacctgggtttccaggtaaacatggcgaaccaggactccgt
ggtccacctggtcctcctggaactccaggttctctctttggattaaaaggacaggaaggg
acaccaggtagacctggtgcacaaggttttcctgggccaagaggacaaagaggacctaaa
ggcgaagaaggtgactgcagtaaatgccttctgagtgatgaactcagaaggggctctact
ggcccccgtggtcctcctggttttccaggaaccgctggccagcctgggagaaaaggagaa
cctggtgatcagggtccacatggtattcctggctatgctggagcaaaaggacaattgggc
caagaaggatttcctggaccaaaaggagaaaagggagaacctgtatacataactactaaa
ggcgccaaaggaatccgaggagatcctggacttcctggtatcagaggggaagatggtttc
ccgggcagagatggattagatggtttaccaggacagcctggccttccgggtgatggtatc
agaggtctccccggggatcctggttatccaggagaattaggcccaaaaggctttccagga
gaaacaggccagccaggtggaggatttcctggcccaaaaggataccgtggtcctccaggc
gaccctggaaccgatggaaaccctgggtctccaggtctgcctggtctaccaggagagcct
ggccaactagactgtgggcaggtgattgaagatttttctagaggagatgcaactgaccca
atatggtcaggtggaggctgtgtgaggccaccaaagggatctcaaggcaagccaggactg
ccaggagccacaggtactaaaggtgcaagaggattcccaggtgatccaggcccagtggga
ttcccagggctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctcca
ggttttactgggcctcggggagacagaggcccaaatggcctacctggactacagggacat
ccaggccttatgggaaagtccggtgctccaggacagccaggacagaagggtgctcctggt
gaagttttgggagcagcagcaggtcctcaaggggatgctgggctgcctggcttccctggc
ttgaaaggcgcgccaggagatcaaggaataccaggaattagaggagcagacggtaaccca
ggactgccaggccccaaaggtgatccagggctgcaaggtctccctggtttgatgggttta
ccaggagcaccaggaactcatggattcccagggccaccaggaaaccccggccctgacggt
ggacctggctctcaaggaccccttggtccaccaggtgcaaggggagaagatggtgagcaa
ggttttcctggtcaagggggcataaaaggtccgtctggtgacaaaggtgaaacaggtttc
ccaggactacaaggtatccgtggcgtgattggtccccctggcattagaggaatggatggc
tttccaggagacaaaggctcaagaggttcacctggcattgatggattcaaaggcatgcca
ggcctgaaaggaagaccaggaatcaaaggaatcaaaggagatttcggtttatttgggact
cggggtgataaaggcgcgcagggcgcacgaggctttaaaggtgaccgtggagaacaaggt
cccccaggagagcccccaaagctgaagcctagcatgatgttggaagttaaaggtgaaaaa
ggagatgctggagaaaccggcaccaagggattctttggcataaaaggtagcaagggaatg
ccaggcctccccggtaagacaggaattcctgggtccccagggcaccccagttttgtgcct
ggtgtgaagggggacattggtgcaaaaggactgacgggtgtgaaagggtatcctggtccg
actggctctccaggcatcagaggcttccctggcagcacaggaggcaggggagataaaggt
gccccaggaatttcgggccattttggtactcctggctcccatggtgaaattggcgagcca
ggagatactataaacttaccaggaatgccaggccttaaaggggaagttggtgtgccgggt
cttacaggcttaagaggaggccctggacaaaaaggcgaaggaggtgatcctggtttacct
ggcattgaaggcctcaagggtatacagggtgtccctggctccttgggacagcaaggtttg
ccgggactggtcggccccccagggcagcaaggaagccctgggacacctggatttcaagga
gaaaaaggagctcccggctggcctggcttaccaggacaagcaggcttgcctggctcaaga
ggaatcagtggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtcca
gatggctatggctctgcgggcttcccaggtcctgtgggtgacaaaggagaagcaggagag
ccaagcagagtggagggcagccaaggcccgccgggtcagaagggagacagaggtgttcca
ggagtccaaggaccatttggcattcctgggcaggatggacttccagggcttcctgggatt
tccaatatatcaggatatcctggcgatacaggttccccaggtctagatggagtgccaggc
tatccaggactacatgggcagcctggaataccagctccgccgggaagcaagggagaaagt
ggacgagcaggtgtgagcggacaagctggccccaaaggggctagaggtgatcctggatta
ccagggacacctgggattcccggttatcctggaccaaaaggtcggaagggtgaacaaggt
gtcattggctttatgggcacagtaggatttccaggtgatttgggacccatcggacccaag
ggggatagaggacttactggctctcagggccctccaggttctcctgggttgccacctctt
cctccaaggctggttgctgagcaaggttcaccaggtccccgtggaaatgcaggacctcag
ggaagtccaggtgatacaggacctcagggtccaccaggagaaccaggtttcagaggctca
cctggagagccaggactccagggcagaggtggcattccagctcctcctggatccagaggt
gaacaaggagcaatggggtttcaaggtccagtgggatttgaaggccagccaggccgcccc
ggtagccccgggctgccgggcatgccgggtcgcagcgttagcattggctacctgctggtg
aagcacagccagtccgaccaagagccaatgtgcccgatcggcatgaacaaactctggagt
ggctacagcctcctgtacttcgagggacaagagaaagcacacaaccaggacttaggcctg
gctggctcatgcttggctcgtttcagtacaatgccattcctctactgtaaccctggggat
atttgttattatgcaaatcgaaatgacaaatcctactggctctcaactacagcacctctt
ccaatgatgcctgtggcagaagaagaaattaggccatatatcagccgctgctctgtttgt
gaggccccagctgtggcaattgctgtccatagccaagaagcttctattcctcgctgcccc
gaaggctggcgcagtttgtggattggatattccttccttatgcacactgcagctggcgat
gaaggtggaggacagtcactggtctctcctgggagctgcctggaagatttcagggctact
cctttcatcgagtgcaatggggcacgtggaacctgtcattactttgccaataagtacagc
ttctggctcactacgattgaccagcccttccaaagcaagccctcggcagatacactcaag
gcaggactcatccgaagccatatcagcagatgtcaagtctgtatgaaaaatttatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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