KEGG   Actinomadura parvosata subsp. kistnae: BKM31_48970
Entry
BKM31_48970       CDS       T04759                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
noa  Actinomadura parvosata subsp. kistnae
Pathway
noa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:noa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    BKM31_48970
  09124 Replication and repair
   03420 Nucleotide excision repair
    BKM31_48970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:noa03021]
    BKM31_48970
   03400 DNA repair and recombination proteins [BR:noa03400]
    BKM31_48970
Enzymes [BR:noa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BKM31_48970
Transcription machinery [BR:noa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     BKM31_48970
DNA repair and recombination proteins [BR:noa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     BKM31_48970
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AQZ68350
UniProt: A0A1V0ADQ1
Position
complement(10828981..10830627)
AA seq 548 aa
MSDGPLIVQSDKTLLLEVDHERADACRKAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVIDALIGFSRYPVPHALLVDVAETMARYGRLRLEKDPVHGLVLTSTDRAVLEEVL
RSKKIQPMLGERLGDDSVVVHPSDRGNVKQALLKLGWPAEDLAGYVDGEAHPITLREDGW
SLRPYQREAAEAFWNGGSGVVVLPCGAGKTIVGAAAMAQAQATTLILVTNTVSAHQWKTE
LIKRTSLTEDEIGEYSGNKKEIRPVTIATYQVMTTRRKGVYSHLELFDARDWGLIVYDEV
HLLPAPIFRMTADLQARRRVGLTATLVREDGREGDVFSLIGPKRYDAPWKEMENQGWIAP
ADCVEVRVTLTDEERLAYAMAESEERYRFCATTPSKTHVTEALVRRHLGEQVLVIGQYID
QLDELGEHLNAPVIKGETRVKERERLYQAFRDKEIQVLVVSKVANFSIDLPEATVAIQVS
GTFGSRQEEAQRLGRVLRPKSDGGGARFYTVVSRDTVDQEFAAHRQRFLAEQGYAYQIID
ADDVMGGV
NT seq 1647 nt   +upstreamnt  +downstreamnt
gtgagcgatggaccgctgatcgtccagtcggacaagacgctgctgctcgaggtcgaccac
gagcgggccgacgcctgtcgtaaggcgatcgcgccgttcgccgagctcgaacgcgcgccc
gaacacgtgcacacctaccgcgtcaccccgctggcgctgtggaacgcgcgcgccgccggc
cacgacgccgagcaggtcatcgacgcgctcatcggcttcagccgctacccggtgccgcac
gcgctgctggtggacgtcgccgagacgatggcccgctacgggcggctgcggctggagaag
gaccccgtccacgggctcgtcctgacctccaccgaccgggccgtgctcgaagaggtgctg
cgctccaagaagatccagccgatgctgggcgagcggctcggcgacgactccgtcgtcgtg
cacccgagcgaccgcggcaacgtcaagcaggccctgctcaagctgggctggccggccgaa
gacctggccggctacgtcgacggcgaggcccaccccatcacgttgcgcgaggacggctgg
tcgctgcggccgtaccagcgtgaggcggccgaggcgttctggaacggcggctcgggcgtg
gtcgtgctgccctgcggcgcgggcaagaccatcgtcggcgccgccgcgatggcgcaggcc
caggccaccacgctgatcctggtcaccaacacggtctccgcccaccagtggaagaccgag
ctgatcaagcgcacgtcgctgaccgaggacgagatcggcgagtactccggcaacaagaag
gagatccgcccggtcaccatcgccacctaccaggtgatgaccacccggcgtaagggcgtc
tacagccatctggagctgttcgacgcccgcgactgggggctcatcgtctacgacgaggtg
cacctgctgcccgcgccgatcttccggatgaccgccgacctccaggcccgccggcgggtc
gggctgaccgcgacgctggtgcgcgaggacggccgcgagggcgacgtgttctccctgatc
ggccccaagcgttacgacgcgccctggaaggagatggagaaccagggctggatcgcgccg
gccgactgcgtcgaggtgcgcgtcacgctgacggacgaggagcggctggcgtacgcgatg
gccgagtcggaggagcgttaccgcttctgcgccaccacgccgtcgaagacgcacgtgacc
gaggcgctggtccgccgccacctgggcgagcaggtgctggtcatcggccagtacatcgac
cagctcgacgagctcggcgagcacctcaacgcgcccgtcatcaagggcgagacgcgagtg
aaggagcgcgagcggctctaccaggccttccgcgacaaggagatccaggtgctggtggtg
tcgaaggtggcgaacttctccatcgacctgccggaggcgacggtcgcgatccaggtgtcg
ggcacgttcggctcgcgccaggaggaggcccagcggctcggacgggtgctgcggcccaag
tccgacggcgggggcgcgcggttctacaccgtggtcagccgcgacacggtggaccaggag
ttcgcggcgcaccggcagcggttcctggccgagcaggggtacgcgtaccagatcatcgac
gccgacgacgtgatgggcggggtgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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