KEGG   Novosphingobium sp. EMRT-2: FA702_00860
Entry
FA702_00860       CDS       T06038                                 
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
nor  Novosphingobium sp. EMRT-2
Pathway
nor03010  Ribosome
Brite
KEGG Orthology (KO) [BR:nor00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    FA702_00860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:nor03011]
    FA702_00860
Ribosome [BR:nor03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    FA702_00860
  Bacteria
    FA702_00860
SSDB
Motif
Pfam: S1 Spt6_S1 S1_2 SH3_16 RuvA_N MazE_antitoxin CsrA RNase_II_C_S1 SH3_2
Other DBs
NCBI-ProteinID: QCI92257
UniProt: A0A4D7D883
Position
complement(159354..161054)
AA seq 566 aa
MASTATPTRDDFAALLDESLGAAGNGGFEGRVVKGTVTAIENDKAVIDVGLKSEGRVALR
EFAAPGQAHGLKVGDEVEVYVDRVENADGEAMLSRDRARREAAWDKLESEFGEGKRVEGV
IFGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDVPQPFQILKMDRRRGNIVVSRR
AVLEETRAEQRSGLIQNLKEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHP
SEVIAIGDTVRVQIIRINQDTQRISLGMKQLESDPWDGVAAKYPVGAKLRGTVTNITEYG
AFVELEAGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEVDSDKRRISLGLKQAQQ
NPWEAFAEKHPVGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRK
GEQVSAVVLDVDVEKERISLGMKQLEKGAPATGGNTGSLRRGEVVTVTVLEVRDGGLEVQ
AGEDGSTGFIKRSDLGRDRDEQRPDRFQVGQKLDAMVTGFDRSKKPNFSVKARQLAEEKE
AVEQYGSSDSGASLGDILGEALKNRG
NT seq 1701 nt   +upstreamnt  +downstreamnt
atggcctctacggcaactcccacgcgcgacgatttcgccgcgctgctcgacgaatcgctc
ggcgctgccggcaatggcggctttgaaggccgcgtcgtcaagggcaccgtcaccgcgatc
gaaaacgacaaggccgttatcgacgtcggcctcaagagcgaaggccgcgtcgcgctgcgc
gaattcgccgcccccggccaggcccatggcctgaaggtcggtgacgaagtcgaagtctat
gtcgaccgcgtcgaaaacgccgacggcgaagccatgctgtcgcgcgaccgcgcccgccgc
gaagccgcgtgggacaaactcgaatccgaattcggcgaaggcaagcgcgttgaaggcgtg
atcttcggccgcgtgaagggcggcttcaccgtcgatcttgacggcgccgtggccttcctg
cccggcagccaggtcgacatccgccccgtgcgcgacgtcaccccgctgatggacgtgccg
cagccgttccagatcctcaagatggaccgccgccgcggcaatatcgtcgtctcgcgccgc
gccgttctggaagaaacccgcgctgaacagcgttcgggcctgatccagaacctgaaggaa
ggccagatcatcgacggcgtggtcaagaacatcaccgattacggtgcgttcgtggacctc
ggcggcatcgacggcctgctccatgtcaccgacatgagctacaagcgcgtcaaccacccc
agcgaagtgatcgccatcggcgataccgtgcgcgtccagatcatccgcatcaaccaggat
acgcagcgcatcagcctgggcatgaagcagcttgaaagcgatccgtgggatggcgttgcc
gccaagtacccggtcggcgcgaagctgcgcggcacggtcaccaacatcaccgaatacggc
gcgttcgtggaactggaagcgggcatcgaaggcctggtccacgtttcggaaatgtcgtgg
accaagaagaacgtccaccccggcaagatcgtttcgacgagccaggaagtcgacgtcatg
gtgctggaagtcgacagcgacaagcgccgcatctcgctcggcctcaagcaggcccagcag
aacccgtgggaagcctttgccgaaaagcacccggtcggttcgaccgtggaaggcgaagtc
aagaacgcgaccgagttcggtctgttcatcggcctcgatggcgacgtggacggcatggtt
cacatgtcggacatcgcctggggcatctcgggcgaagacgcgctggcgctgcaccgcaag
ggcgagcaggtttcggccgtggttctcgacgtcgatgtcgagaaggaacgcatcagcctg
ggcatgaagcagcttgaaaagggcgctccggccaccggcggcaacaccggttcgctgcgt
cgtggcgaagtcgtcaccgtcaccgttctggaagtccgcgatggcggcctcgaagtgcag
gctggcgaagacggctcgaccggcttcatcaagcgttcggacctcggccgcgaccgcgac
gaacagcgtccggatcgcttccaggtcggccagaagctcgatgccatggtcaccggcttc
gatcgttcgaagaagccgaacttctcggtcaaggcccgccagctggccgaagagaaggaa
gcggtggaacagtacggttcgtcggattcgggcgcctcgctcggcgacatcctcggcgaa
gcgctgaagaaccgcggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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