KEGG   Novosphingobium pentaromativorans: JI59_13140
Entry
JI59_13140        CDS       T03399                                 
Name
(GenBank) Fis family transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
npn  Novosphingobium pentaromativorans
Pathway
npn02020  Two-component system
npn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:npn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JI59_13140
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    JI59_13140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:npn02022]
    JI59_13140
   02035 Bacterial motility proteins [BR:npn02035]
    JI59_13140
Two-component system [BR:npn02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   JI59_13140
Bacterial motility proteins [BR:npn02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    JI59_13140
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_3 HTH_20 MCM Mg_chelatase HTH_28 HTH_23 AAA AAA_16 AAA_7 HTH_29 MCM_lid HTH_24 AAA_19 MerR I-TevI_DNA-bd HTH_11 Sigma70_r4_2 AAA_2
Other DBs
NCBI-ProteinID: AIT80648
UniProt: G6EAJ9
Position
complement(2713870..2715171)
AA seq 433 aa
MGGLNFDSKFAQRHGPLADRGMAIATSLLDLGAIDLRDAADEAPGRPRTRSVQLSRGTAP
AFGRKGASQIALTYVDPVSEASLAMLLAAMAGADEPIAADPESLSVFALADRLAGSDIPV
LINGPTGTGKEVLSRFIHARSPRREGPFIAVNCAAMPETMLEAMLFGHQKGAFTGATQAS
EGFIRAADGGTLLLDEIAEMPLQLQAKLLRALQEQEVVPIGSTKPIKVDVRIIACANRDL
PTEVAEGRFRADLYYRLNVFPLTLRPLRERADDIAPLAFAMALRHAPDPAKVPCPSEAAI
AMLKLHSWPGNVRELENVMRRALLLAHGNDMITPEHIVFDSPARLIQSPVTATGFGVTVA
QPQVEEAETPRKLSSIVQISEARAIVETLEACGGSRVRAARELGISERTLRYRLASMRDA
GIEIGRAAAGGRR
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgggcgggttgaatttcgactcgaaattcgcccagcggcacggaccgctggcagatcgg
ggaatggctattgccacttcactcctcgatcttggtgcaatcgatttgcgtgacgctgcg
gacgaggctcctggccgtccgcgcacgcggtcggttcaactttcacgcggcactgcgccc
gcattcggtcgcaagggcgcatcgcagatcgcgttgacctatgtcgatccggtcagcgaa
gcctcgcttgccatgctgctcgcagccatggccggcgccgacgagccgatcgcggcggac
ccggaaagcctttcggtcttcgctctcgccgaccgcctggccggcagcgacattccggtg
ctgatcaacggcccgaccgggaccggcaaggaagtcctgagccgcttcatccacgcccgc
agcccgcgccgcgaaggcccgttcatcgccgtcaactgcgcagcgatgcccgagacgatg
ctcgaggcgatgctcttcggccaccagaagggcgcattcaccggcgctacccaggcgagc
gaaggcttcatccgcgcggcggacggcggcaccctgctgctggacgaaatcgccgagatg
ccgcttcagctccaggccaagctgctgcgcgccctgcaggaacaggaagtcgttccgatc
ggctcgaccaagccgatcaaggtcgacgtgcgcatcatcgcctgcgccaaccgcgacctg
ccgaccgaagtggccgaaggccgcttccgcgccgacctttattaccgcctcaacgtgttc
ccgctgacgctgcgcccgctgcgcgagcgcgccgacgacatcgccccgctcgccttcgcg
atggcgctgcgtcacgcgccggacccggccaaggtgccgtgccccagcgaagcggcgatc
gcgatgctcaagctgcactcctggcccggcaacgtccgcgagctggagaacgtcatgcgc
cgcgcgctgctcctcgcccacggcaacgacatgatcacgcccgagcacatcgtgttcgac
agcccggcccgcctgatccagtcgccggtcacggccaccggcttcggcgtcaccgtcgcc
cagccgcaggtcgaagaggcggaaacgccgcgcaagctttcctcgatcgtgcagatctcg
gaagcccgcgccatcgtcgagacgctcgaggcatgcggcggcagccgggtgcgggcggcc
cgcgaactcggcatctccgaacggaccctgcgctatcgcctcgcttcgatgcgtgatgcc
gggatcgagatcggcagagcggccgcaggaggccgtcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (33)   

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