KEGG   Nanorana parkeri (Xizang Plateau frog): 108787174
Entry
108787174         CDS       T04897                                 
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03440  Homologous recombination
npr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    108787174 (BRIP1)
   03460 Fanconi anemia pathway
    108787174 (BRIP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npr03400]
    108787174 (BRIP1)
Enzymes [BR:npr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     108787174 (BRIP1)
DNA repair and recombination proteins [BR:npr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     108787174 (BRIP1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     108787174 (BRIP1)
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD
Other DBs
NCBI-GeneID: 108787174
NCBI-ProteinID: XP_018412162
Position
Unknown
AA seq 1234 aa
MSSLRSEYTIGGVKILFPCKAYPSQLAMMNSIVRGLNCKQHCLLESPTGSGKSLALLCSA
LAWQQAQYEKPVDEDQTQKDWKKEEAVPCGCTCHSKIPNSSEASTSTSFSNAGPSSSEFS
SHTDASRSKSTLASKLSAKKASFATDEEDNDFQMDRKRIRQSPLEQQTRKRRCFEKGVQF
IDDDDDTSECYGASSSHQQDRASQESCXSPQQVSDSSHHLSTSRGPCNLCFCGCNKTQDK
TEMNGKKKDNEQKQRVPKIFFGTRTHKQLAQITRELRKTAYSGVRMTILSSRDHTCVNPD
IQFNRNEKCKELLEAKDGSSCRYYYGAPKMSEQNVLQYRLGVTQAWDIEELVGLGKRLRA
CAYYAARELMKEADIVFCPYNYLLDSQIRESMEICLQDQVVILDEAHNIEDCARESASFS
VTDAQLMFARDELDSMVNHRIRASDHEPLRGVCYNLTNWIRECASHLVEREYESSCKVWN
GNEIISIFHDMGITNATFPMLKGNLAAVVEKEEKTTMLNGQETVVKVPVLSSPTQMVLKG
LFVVLDYLFRHNNRFAEDYRIALQQSYIWTNKQDVADENGFFARQNYRRRVRQKTLVYTL
NFWCLNPAVAFSDLSGNVRTIVLTSGTLSPMGSFSSELGVKFAIQLEANHVIHKSQVWVG
TVGAGPKGRKLCATFQHTETFDFQDEVGALLLSVCQTVSHGVLCFLPSYKMLEKLKDRWM
HTGLWENLEGIKTVIKEPQGGDKTDFDKLLQLYYDAIRFRGEKDGALLIAVCRGKVSEGL
DFSDDNARAVVTVGIPFPNVKDLQVELKRKYNDQHSRSRGLLPGSLWYEIQAYRALNQAL
GRCIRHKNDWGALILVDDRFRNNPKYITGLSKWVRQLVQHHSTFNNALESLAEFSRNQQQ
RVQMQSLTTNEEVPQTHSSFSRDDYPSASLLDLTVHPSESVLEHTQVTAIAPDPSPSVIT
ILSSSDHSESDEDSTPKNKCDFEQPQSANSERGKSNRFDNQKLNLTKQQSSFYNYFINSP
LTSTPLPTSARRGSLTDSSLNKGAANVSEATIEKCPNIGIQIEANTGDSDESVCNVVPLF
RENNIVVVEENEPSLAEIPVEEDEADDTIHFTPELFDNENNHNNPNPEKQENCTEYQTDT
DCMGNNAYATGGSYNANLAVSNSGGLENDLNSCNIDINIKNKDVFNSECLSSVAQVSSTN
YTNNTEIDQIQRKEKTRNRLSRSKNRGLSSFVLE
NT seq 3705 nt   +upstreamnt  +downstreamnt
atgtcttctctgcgttcagagtatacaattggtggagtaaaaattttattcccatgcaaa
gcttatccatcacagcttgccatgatgaattcgattgtgagaggattgaactgcaaacaa
cactgtttgctggaaagtcccactggaagcgggaaaagtttagcgttactttgttctgct
cttgcatggcagcaggctcagtatgaaaagcctgtagatgaagatcaaacccaaaaagac
tggaaaaaagaagaggctgttccgtgtggctgcacgtgtcattcaaagatcccaaatagt
agtgaggcatccacatctacctccttcagtaatgctgggccctcttctagtgagttttca
tcccacacagatgctagcagaagtaaatcaactctagcttcaaagctgtctgcaaaaaaa
gcttcttttgctacagatgaggaagataatgattttcaaatggatagaaaacgcatccgg
caatcacctcttgaacagcagacacgaaaacggcgctgttttgaaaaaggtgtgcaattt
attgatgatgatgatgatacgagtgaatgttatggggcatcgagtagtcatcaacaagat
agagcttcacaggaaagctgctgaagtccccagcaggtgtcagattcctcacatcacctt
tcaacatctcgtggaccatgcaatctctgtttctgtggatgcaataaaacccaggacaaa
actgaaatgaacggaaaaaagaaagacaatgaacaaaagcagagagtgcccaaaatattt
tttggtacacgaacacacaagcaattagcccagataaccagggaactacggaaaacagct
tactctggggtgcggatgactatcctttccagtagagatcatacctgtgtaaatcctgac
attcagtttaacagaaatgagaagtgtaaagaacttctggaagcaaaggatggatcttct
tgtcgttactattatggagctccaaaaatgagtgagcagaatgttctacaatataggctt
ggtgtaacgcaagcttgggacatagaagagctggtaggcctggggaagaggcttcgtgcc
tgtgcttactatgcagctcgtgaactaatgaaagaagctgacattgtgttctgtccttac
aactatcttttggactcacagataagagaaagtatggaaatatgtttgcaagaccaggtg
gtaatccttgatgaagcccacaacattgaggactgtgccagagaatctgccagctttagt
gtgacagatgcacagctgatgtttgcccgagatgagttggacagcatggtgaaccatagg
atcagagcaagtgatcatgagcctcttcggggagtgtgctacaatctgacaaattggata
agggaatgtgccagccatttggtggaaagggaatatgaatcatcttgtaaagtgtggaat
ggtaatgagattatttcaattttccacgatatgggaataacaaatgcaacatttcctatg
cttaagggtaatcttgctgctgtggttgagaaagaagagaagacaacaatgctgaatggc
caggaaactgtagtgaaagtgccagtactgagctcgccaacacaaatggttttgaaaggg
ttgtttgtggtgttagattacttatttcgccataacaacagatttgcagaagattacaga
attgctctgcagcagtcttacatatggacaaacaaacaagatgttgctgatgaaaatgga
ttctttgcaagacaaaattatcgcagacgtgttcgtcaaaagaccttggtttatacactg
aatttttggtgtttaaaccctgccgtggctttttccgatttaagtggtaatgttcgcaca
attgtcctgacatcaggcaccttatctccaatgggatcattttcctctgaactaggcgtg
aagtttgctatccagctggaggcaaatcatgttattcataaatcccaggtatgggttggc
actgttggtgcaggtccaaaaggccgaaaactttgtgcaacatttcagcacacagagact
tttgattttcaagatgaagttggtgcccttttactgtcagtgtgccagactgtaagccat
ggagtactttgctttctaccatcctataagatgctggagaaattgaaagacagatggatg
catacaggcttatgggagaacttggaaggaatcaagacagtcattaaagaaccacaagga
ggagataagacggactttgataaattgctgcagctctattatgacgctatacgttttaga
ggtgaaaaagatggtgccctcctgattgcagtttgcagaggtaaagtgagcgaaggactg
gacttctcagacgacaatgcccgggcagttgtaactgtaggaattccttttcctaatgtg
aaggatcttcaagtcgaactaaaaagaaagtataatgatcaacactcaaggagtagagga
ctattgcctggaagcctgtggtatgagatacaagcataccgtgccttgaatcaagccctg
ggcaggtgtatccgacataagaatgattggggtgccctcatattagtagatgaccgtttc
agaaataatccaaaatacataactggattgtcaaaatgggtacggcagctagtccagcac
cactcgacctttaacaatgctctagagtctctcgctgagttttctaggaatcagcagcag
agagttcaaatgcagagtttgactacaaatgaagaagttccccaaacacattcctccttc
tccagagatgattaccctagtgcgtcattgttggatctcactgtccacccttctgagagt
gttttagaacatacacaagtgactgctatagcacctgatccttcaccatctgtgattaca
attttatctagttcagatcactcagaatctgatgaagattctacacccaaaaataaatgt
gattttgagcagcctcaaagtgcaaactctgaaagaggaaaatctaacagatttgataat
cagaaactgaacttaacaaaacaacagtcttcattctacaactacttcatcaatagtcca
ctcacatcaactcctctgcctacttctgccaggagaggttccctcacagacagcagcctg
aacaaaggagctgctaatgtcagtgaagcaaccattgaaaaatgtccaaatattgggata
caaattgaagccaatactggagattcagatgaaagtgtgtgtaatgtggttccacttttt
cgtgaaaataacattgttgtagtggaagaaaatgagccctcccttgcggaaatacctgtc
gaagaagatgaagctgatgacaccatccattttacacctgaactttttgataatgagaat
aatcataacaatcctaatcctgagaagcaagagaattgcactgaatatcaaactgatact
gattgcatgggaaataatgcatatgcaactggaggcagctataatgccaatttagcagtg
agcaattcaggaggactagaaaatgatttaaattcttgcaatattgacataaatataaaa
aataaggatgttttcaacagtgagtgcttatctagtgttgcacaagtcagttccacaaat
tatacaaacaatacagaaattgatcagatacagagaaaggaaaaaacaaggaatagactc
tccagatctaagaacagaggtttgtcttcctttgttttagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (55)   

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