KEGG   Nicotiana sylvestris (wood tobacco): 104212718
Entry
104212718         CDS       T05026                                 
Name
(RefSeq) probable RNA-dependent RNA polymerase 5 isoform X1
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104212718
Enzymes [BR:nsy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     104212718
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     104212718
SSDB
Motif
Pfam: RdRP
Other DBs
NCBI-GeneID: 104212718
NCBI-ProteinID: XP_009760370
UniProt: A0A1U7VEV4
Position
Unknown
AA seq 1060 aa
MGDFYSYNNEEVVEEVIKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILS
KISVCQIKKTLSGFIVFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSS
SSVNFSPRNGPLFQATVHNNDIVGDGSDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEY
RNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFE
SYIWTKYGHLCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGD
ENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKKNSMDKEEKIDTVKCYFV
RMESLNPYENLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSV
NIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERY
SNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQIRPSMI
KVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILNNTLEET
QRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERNGLKGGK
LPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKN
LGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPWCRIHST
PKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKNNTTENE
ETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKEEYISTSVLGEIY
DRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDLA
DEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAGS
ALCRLHAELHAKEHNQKIMAVSPSILHKLLNLRNKEVSNK
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgggagatttttactcttacaataatgaagaagtagtagaagaagtgattaaacttcca
ccttcagtagaacaaatgctaaaccaaatctgcaaaaatcagagacaaaatccaatagat
gaaaaagtacgaagacttcttttatcaatcggagaagaaggttcacttgatattttgagt
aaaatctcagtttgtcaaattaaaaaaacactcagtggatttattgtatttatggcaaaa
aaatattatcagtccgaaactcaacagttttatcagcaaactccagtttcatctgctgaa
agtttttttcagtctcctcaaattcaaaggatttctctttcttctccaaattcttcttct
tcttcagtaaatttttctcctagaaatgggccactttttcaggctactgttcataataat
gacatagtcggtgatggatctgattctccaacatctgctccacaaatgctatcacctcca
acaagtcccgaaagaacaaactttcgaagagatagtcatgatcctatgccatctgaatat
agaaacagggctggcatacaaggaataagcaaacagttgctggcactcagtaatcttgag
ttcaggaaattatttttgattctacactacattggaaggaggaagttggaggatgtcatt
atgcttcatgatgtcggtgaaattttggatatgacatgtcaacctatggctcattttgag
tcatatatttggactaaatatggtcatctttgtgaaaatgttaaacgggtgcagtatctt
gattgggattccggaaggagtcatttctatcattgccatgtttattcggatggaagctat
gcttttaagggtccttacctgaaagcagaaagaacccatctacaacagtcattaggagat
gaaaatatattggttgtcaggtttatggaagaagccccaaggtgtccacaagagattgtt
aagaatggaattcttattggtttgaggcgctatcacttttttgtttataaggatgatggg
aagaagaaaaattcaatggacaaagaggaaaagatcgatacagtcaaatgctactttgtt
cgaatggaatctcttaatccttatgaaaatttaacttacattttgtacgacaagatagtc
cacaaagcaaggtgtcgtttcatgcatgtacatatggtctctagcatggctaaatacatg
gccaggttctccctaattttatccacgacagtaaagcttcaagttgatctgaattcagtg
aatattgacagaattgaagatatatattgtcatgacaagaatggacgtactctctatgac
gaagatggaaaaccccttatacacacagatgggacaggatatatttcggaagatttggca
agaaagtgtccacaagattttttcaatgtgaagtataagaatgccaagttagagagatat
tccaatggtgttgaacctggggagaattcatccgaggtgggagaggcagaatttcagagt
ggggaaccgcctttgttaatgcagtgccgtctattctacaatggtcttgctgtaaaggga
acccttctagtcaatagaaagctgccacggtgcacgattcagattaggccttcaatgatc
aaggttgaggctgacccaaaattgtcaagaactcgaatgtttaactcgctggaaatagtt
acacctagttttaaacctcggaatacttatctatcaagaactcttattgctctgttgacc
tatggaggtgttccggcagagtatttctttgatatactgaataacactttggaggagaca
caaaggttatactcagatgaggtgacagcactaaaagttgcagcgaaccatagagatcgt
gatgatgcctctattgccacgggtatgataatggttgtagtacctctctgtgaaccgtat
cttaggtgttgcttatcttccttggcaaaggaagaaagaaatgggctaaaaggaggaaaa
cttcctatctctgatactttctatttaatggggacagctgatccgacggatactttaaat
cctcatgaagtctgtgttattcttgaacacggacagatatctggagaggtactagtatac
aggaatcccggacttcattttggtgatatccacagactacttgctgtcccagtgaagaac
ctcggtgacgtagttggaaatgctaaatatggaatatttttctcgaccaaaggtccaaga
tctgcagccactgaaattgctaatggcgattttgatggagataaatattgggtctctcaa
aacccccagctcttaaaatattaccatgcaagtagaccgtggtgcagaatccattcaaca
ccaaaggcattgcatagggagcccaaagacttctctgccgaggaaatggaacatgagctc
tttcagacattcctagaaactaggatgccaaactatagtatggctgacgcttcttcaagc
tggttggcgctcatggatagacttctgatgttgaggaagaataacaccacagagaatgaa
gagacaaagaccatgaaagaaaagttgtttgagttgactgatttgtattatgacgctata
gacgcccccaaaagtgggaataaggtctacatcccgaaaaggttgaaagtggataagttt
ccacatttcttggaaaagaaagaagagtatatctctacttcagtactaggagaaatttat
gacagggttaagtcctttaaagctgaagcagcagttgcagtagaaatcaagaaacttcct
gcttttgaggtcaaaatccccgagacatgcttgaggttatgggaggaaaggtacaaaaag
tacagatttgagatgatgcaagcgttgaacaccagcagtgaatcgaaaaatgacttagcg
gacgaggttgttaaaaagtacaaacagttgctatatgaagcgccggatatggaggagagt
gcaaggagcacaacggacatatttaacgatgcacttgctatttatcgcgttacttatgat
tatgcaaaggctatcggagacgtcaaaaaatgtggttttgcatggaaagttgcaggttca
gctctttgtagacttcatgctgagcttcatgcaaaagaacataaccaaaaaatcatggct
gtgtcaccttctatattgcacaaattattgaacttgaggaacaaagaagtgtctaacaag
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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