KEGG   Neurospora tetrasperma: NEUTE1DRAFT81093
Entry
NEUTE1DRAFT81093  CDS       T03451                                 
Symbol
NEUTE1DRAFT_81093
Name
(RefSeq) DNA repair helicase RAD25
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
nte  Neurospora tetrasperma
Pathway
nte03022  Basal transcription factors
nte03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NEUTE1DRAFT81093 (NEUTE1DRAFT_81093)
  09124 Replication and repair
   03420 Nucleotide excision repair
    NEUTE1DRAFT81093 (NEUTE1DRAFT_81093)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nte03021]
    NEUTE1DRAFT81093 (NEUTE1DRAFT_81093)
   03400 DNA repair and recombination proteins [BR:nte03400]
    NEUTE1DRAFT81093 (NEUTE1DRAFT_81093)
Enzymes [BR:nte01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NEUTE1DRAFT81093 (NEUTE1DRAFT_81093)
Transcription machinery [BR:nte03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     NEUTE1DRAFT81093 (NEUTE1DRAFT_81093)
DNA repair and recombination proteins [BR:nte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     NEUTE1DRAFT81093 (NEUTE1DRAFT_81093)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD AAA_34
Other DBs
NCBI-GeneID: 20830371
NCBI-ProteinID: XP_009850598
JGI: Neute_matA2_81093
UniProt: F8MKV8
Position
Unknown
AA seq 864 aa
MPPKRKAVGPPQAGVAKAGRTSALSTPGPATPRSLESSFQSDGDDDLNDDDVDEVIKRKE
EVIAREADEFVNTWAVDSSRFQSRQDGGGSHRDGATQFFGSGKRDFSYLNLKPDHDQKPL
WIDPEKGTIILEKFSPDADRVTDFLVTIAEPKSRPHFLHEYQLTAHSLYAGVSIGLQSKD
IIDTLDRFLKTPLPESIRLFIESCTKSYGKVKLVLNNNKYFVESSDAELLQKLLRDEVIG
KWRVQGSGDITTSYAPTMGGLVIPGTKDAAGVNQADLNKSGNKKTAEDGAAGAAATNEAD
LYAAINEEDDEDDKDAVHAFEIPETAVEIVQRRCLDLGFPILEEYDFRNDSNNADLEIDL
RPNTQIRPYQEQSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLCTSSMS
VVQWRQEFLKWSNINPDDIAVFTAESKNKFSGNTGIIVTTYSMVTNNRERSHDSKKMMDF
LKSREWGLMLLDEVHVVPADVFRRVISSIKSHSKLGLTATLLREDDKISHLNFLIGPKLY
EANWMELSEKGHIAKVQCAEVWCPMPTEFYDEYLRANSRMKRTLYAMNPRKFQACQYLIN
YHEARGDKIIVFSDELYSLKQYALKLNKVFIYGGTGQAERMQVLENFQHNPQVNTLFLSK
IGDTSLDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDVGFNAFFYSLVSKDTQEM
YYSSKRQAFLVDQGYAFKVITQLANIENTPDLAFATAQERRELLQRTLVDNEKGAEDDVE
TDDLFGKVGRGRGGGGAKGRAAAVRRMAGTLGELSGGQDMAYIEQNKAANKGLKKKGAAK
AEQSAFFKKLQREKERSRALARQG
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgccgcccaagcgaaaagcggtcggccccccccaggccggcgttgccaaagctggccgc
acttcggccctgtccactcccggccccgcgactccccgcagcctcgagagctcgttccag
tcggacggcgatgatgatttgaacgacgacgacgtcgacgaggtcatcaagaggaaagag
gaggtgattgcccgcgaggccgacgagttcgtcaatacatgggccgtcgatagtagccgt
ttccagagccgacaggacggtggcggcagtcatcgtgacggcgccacccagttctttggc
agcgggaaacgcgacttttcgtatctgaacttgaaacccgaccacgaccagaagccgctg
tggatcgaccccgagaagggcaccatcatcctcgagaagttcagcccggacgccgaccgc
gtcaccgacttcctcgtcaccattgccgagcccaagtcacggccgcacttcctgcatgag
tatcagttgacagcacacagtctctacgctggtgtctccattggcctgcagtcaaaggat
attatagataccctggatcgcttcctcaagaccccccttcccgagtccattcgcctcttc
attgagtcgtgcacaaagagctacggcaaggtgaaactcgtgctgaataacaacaagtac
tttgtagaaagctcggatgccgagttgttgcagaagctgctccgcgatgaagtaatcgga
aagtggcgtgtccagggctccggtgatattaccacctcctatgcgcccaccatgggcggc
ctggtcatccccggcacaaaagatgctgccggtgtgaaccaggcagacctcaacaagtct
ggcaacaagaagacggccgaggacggggccgcgggcgctgcggcgactaacgaggccgac
ctctacgcagccatcaatgaggaagacgacgaggacgacaaggacgccgtccatgccttt
gaaatccccgaaaccgccgtcgagattgtccaacgacgctgtcttgacctaggatttccc
atcttggaggagtacgacttcaggaacgactctaataacgcggacctggaaatcgattta
cggccaaacacacagattcgtccgtaccaggagcagagtcttagcaaaatgtttggtaac
ggcagagcaaagagtggcatcattgttctgccgtgcggtgcaggcaagaccttggtcggc
atcacggctgcctgcaccatcaagaagggtgtcatcgtcctgtgtacaagcagtatgtcc
gttgtgcaatggcgtcaggagttcctcaagtggtccaacatcaaccccgacgatattgcc
gtctttaccgctgagagcaagaacaagttctctggtaatactggtatcattgttactaca
tattctatggttaccaacaaccgagaacgatctcacgactccaagaagatgatggatttc
ctaaagagtcgtgaatggggtctgatgcttctcgacgaggttcacgtcgtccctgccgac
gtcttccgaagagttatctcttccatcaagtcgcactccaagctgggtctcacagccacc
ctactcagagaagacgacaagatttcccacttgaacttccttatcggtcccaagctctac
gaagccaactggatggagctgtccgaaaagggtcacatcgccaaggtccagtgtgcagag
gtgtggtgccccatgcccaccgaattctacgacgagtatcttcgtgccaactcgcgtatg
aagcgcaccctttacgccatgaaccctcgaaagttccaggcctgccagtacctgatcaac
taccacgaagcccgcggcgacaagatcattgtcttctccgacgagctgtactcactaaaa
caatacgccctcaagctgaataaagtcttcatctacggcggcaccggccaagccgagcgc
atgcaagtgctcgaaaacttccagcacaacccgcaagtcaacacgctcttcctctccaag
atcggcgacacctcgctcgacttgcccgaagccacctgtctcatccaaatctcatcccac
ttcggttcccgtcgtcaggaagcccagcgtctaggccgcattctccgagccaagcgccgt
aacgacgtcggcttcaacgccttcttttattcgctcgtgtccaaagacacgcaggaaatg
tactactcgtccaagcgccaggccttcctggtcgaccagggctacgccttcaaggtgatc
acgcagctggccaacatcgagaacacgcccgacctggctttcgccacggcgcaggagcgg
cgcgagctgctgcagcgcacgctggtcgacaacgaaaagggcgccgaggatgatgtcgag
acggacgatttgtttggtaaggtcgggcgcggaaggggtggtggtggtgcaaagggcaga
gcggcggcggttcggagaatggctggaaccctgggcgagctcagtgggggtcaggatatg
gcgtacattgagcagaacaaggcggcgaataaggggttgaagaagaagggtgccgccaag
gcggagcagagcgccttcttcaagaagctgcagagggagaaggagaggagtcgggctttg
gcgagacagggctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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