KEGG   Nematostella vectensis (starlet sea anemone): 5506234
Entry
5506234           CDS       T01037                                 
Name
(RefSeq) collagen alpha-1(XVI) chain
  KO
K06237  collagen type IV alpha
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve04512  ECM-receptor interaction
nve04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nve00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    5506234
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    5506234
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nve04147]
    5506234
   00536 Glycosaminoglycan binding proteins [BR:nve00536]
    5506234
Exosome [BR:nve04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   5506234
Glycosaminoglycan binding proteins [BR:nve00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   5506234
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 5506234
NCBI-ProteinID: XP_032230469
Position
Unknown
AA seq 871 aa
MQLLLLVFLCICGLSWGQIDWGPGACAQMAKACWPLPKGAQGPPGPPGEAGPAGRRGAPG
PPGPPGPRGYPGRVLTPPPGPPAPKGDRGEPGYPGEPGEGGDVGFPGERGLRGFGGFPGA
KGHKGKEGDTGLPGRRGPPGSSSSNARECMWKMDDGKDRGVIVNCTIQKTSSSTAIHVTY
NGPIEIGLCKRCCKRWFFTFNGQECRSPAPIDAIMSGGLRPDYPHYQYGRVEGICQVPFP
AGYLRVSLNLENCKGFQDSDVPIKVSLYKPNGLVTLHEIVPPHVRSQNIDWRCSSMLQSC
ELNNGIIGLKGNQGFPGPMGLDGIPGIPGPPGDRGDPGTSPRVPPFPYWHRVKGAKGEIG
FPGIKGEKGLKGFPGTPGDQGRQGVPGKRGYDGAKGREGEDGANGPPGSPGSANMNWKQC
VFELELNKQNGIIYECRFLKYSNVTSLRISYHGDTQIGLCGSCCKHWRFLLDGQPCWSPG
PIDATYSGLMLVNVNQRNTLPVFRHGTISGYCNSLPRGVVRVALDLSNCPGYPSDSIVVS
TEVVATGRIIIEEVPAPQARTLIGYRMMNFSCFCLLWVVMLINIVSCQREKGQRPTPMFW
GIDNCNKLEENCGMRFQGSKGTPGAPGDPGLYGPPGPPGKKGPKGPKGRTAILPNKAMIG
AIPPFYGPKGDRGVPGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGAQGDSGFPGVPGPK
GFPGGIGSVRSWKSCTWKFDPTQEYGLVKECDFVKHHSATLLRVTYEGSMRTGFCTKCCK
RWYFTFNLEECSAPHRIEARLEGLKDHPFPEYRHDQLDGQCVLPQGRVNVGLWVEDCTGH
TRSPKSNITLVDMSGRMFIEEVDVVQSNNRI
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgcagttgcttctgttggtattcctgtgcatttgtggactaagctggggccaaatagac
tggggtccaggcgcctgcgcccagatggccaaggcctgctggccccttccgaagggcgct
cagggaccacccggaccgccaggcgaggctggtccagccgggcgtcgaggggcaccaggt
ccacccggtccccccggccctcgggggtatcctggtagagtccttacaccaccaccagga
cctccagctccgaaaggagatcgcggtgaacccgggtatccaggagaacccggagaaggt
ggagatgtcgggttccccggtgagcggggacttcgagggtttgggggatttccgggagct
aagggtcacaaagggaaagaaggtgatacaggattaccgggaagacgggggcccccggga
tctagcagctcaaatgcccgcgagtgtatgtggaagatggatgacggcaaggatagagga
gttatagtgaactgtaccatccaaaagacgtcctcttccaccgccattcacgtgacctac
aacggaccaatagaaatcggcctctgtaaacgttgctgcaagcgttggttcttcacgttc
aatggtcaggaatgccgcagccctgcgcctatcgacgccataatgtcaggggggctacga
ccagactaccctcattaccagtatgggagggtggagggaatctgccaggtcccttttccc
gcgggatatctgcgggtttcattgaatttagagaattgtaagggctttcaggattcggat
gtccccataaaggtctccctgtataaaccgaatggattggttacattacatgaaatagta
cccccgcatgttagaagtcaaaacatagactggaggtgtagttcgatgcttcaatcgtgt
gaactcaacaacggaataattggactaaaaggaaaccagggctttcctggacccatgggg
ctggatggcataccaggtattcccggtcctcctggcgatcgaggggacccaggaacgtcc
ccaagggtacccccttttccatactggcaccgcgtcaaaggcgccaaaggggagatagga
tttccagggatcaagggagaaaaaggcttgaaagggtttccaggaactccaggtgaccag
ggcaggcaaggagtaccaggaaaaagaggttatgatggggctaaagggcgtgaaggggaa
gatggtgcgaacggtcctccaggaagtcctgggtctgccaacatgaactggaaacagtgc
gtgtttgagttggagctcaataaacagaacggaattatatatgaatgccgcttcctaaag
tacagcaacgtcacctcgctgcgtatcagttaccatggcgacacgcagataggtctgtgc
ggttcgtgctgcaagcactggcgttttctattggatggccagccctgctggtcaccaggc
cccatagacgcgacatacagtgggctcatgttagtcaacgtcaaccagaggaacacactt
ccggtttttcgccatggcaccatttccggctactgcaattctcttcccaggggggtagtg
agggttgcattagatttgtctaactgcccagggtacccctctgattctatcgtagttagc
accgaggttgttgcgacagggagaattattatcgaagaagtccccgccccacaagcacgc
actctcatcggatacagaatgatgaacttttcctgcttctgtttgctttgggtagtgatg
ctaataaacatcgtctcatgtcagagagagaagggacagaggccgacgccaatgttctgg
ggaatcgataactgtaacaagcttgaagaaaattgcggtatgaggttccaaggctctaaa
ggcactccaggcgcacctggtgatccaggcctatatgggccaccaggaccaccaggcaaa
aagggtccaaagggtcccaagggacgaaccgccatactccctaacaaagcaatgataggt
gcgataccaccattttacggtcctaaaggagataggggagtacccgggagacaaggcatg
tatggactaagaggccctcctggacgaaaaggggaccaagggacacgtggcccccctggc
ttgaatgggcctacgggggcacaaggagactctggcttccctggggtacctggaccaaaa
ggcttccctggggggatagggtctgtcaggtcatggaaaagctgcacatggaagtttgac
cccacccaagagtatggactcgtgaaggaatgcgattttgtcaagcaccactcggccacg
ctactccgcgtgacgtatgaggggagcatgcgcactgggttctgtaccaagtgttgcaag
aggtggtatttcacctttaacctggaggagtgttcggcaccacatcggatcgaggcgaga
ctagagggcttgaaggaccacccttttcccgaataccgacatgaccagctagatgggcag
tgtgtactaccacaaggaagggtcaacgtcgggttatgggtagaggactgcacaggccac
acgcggtctcccaagtctaatatcactttagtggacatgtcaggaagaatgttcatagag
gaagtagatgttgtgcagagtaataataggatttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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