KEGG T01081: 100115613

Nasonia vitripennis (jewel wasp): 100115613

Entry

100115613         CDS       T01081

Name

(RefSeq) probable DNA mismatch repair protein Msh6

K08737

DNA mismatch repair protein MSH6

Organism

nvi Nasonia vitripennis (jewel wasp)

Pathway

nvi03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:nvi00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100115613
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nvi03400]
    100115613
DNA repair and recombination proteins [BR:nvi03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     100115613

SSDB

Motif

Pfam:

MutS_V MutS_III MutS_I MutS_IV MutS_II CIMR

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

NASONIABASE:

UniProt:

Position

3:20910862..20917167

AA seq 1151 aa
MPKVNTLFNYFTSPKGASPRSNNSSPAPKPRASKAKSETPKREQKNKDTKRGKGKDKENV
RENQERKRSLDDLDDDEEPKESEEAVTPKPTPKRRRIIIPEDNSEDSGDEYKPDESAESE
EDLDLSVVSESEPNTASEDEDETPKKKQKMSNIKTPSRRGGGAKKSIAKKDSGTGQEQPT
GKASDTQDWPHLKYEFLQKDKIRDNKKRRSTDPDYDPRTVYVPPDFLDKQTPAMRQWWVL
KSDHYDCVLFFKVGKFYELYHMDAVTGVNELSLTFMRGEFAHSGFPEIAYGRFSASLIER
GYKVARIEQTENPEMMSQRCAKMGKTTKFDKVVKREICQISTKGTRVYTAQDAEASAPTS
TYLLSIIEKQERNQNISSYGVCFIDTTIGDFNLGQFQDDRCNSRLLTLLAHYPPAHVIYE
RNNLSQTTLKILNNLLPGAMKEALQKEVQFWSSTKVLNVLHEADYFKNEEDSSFSWPKGL
EPYLNDGDSLGLTPLEEKQLAVNALGGCVYLLKNYQLDHQLLAQGRFKTYVPPDFSVNAE
KSDGTKLAYNMVLDAMTITNLRVLGNEGSLIKTLDNCCTAFGKRLLREWVCRPSCRKSVI
VERQNAITELIDNPDVVQEVRSKLSGLPDLERLLSKIHVQGNAAKLRNHPDGRAIMFEGP
AYSKKTIVDFITALNGFEDILKLIKKFSKFTNPLINKCTQLEPEGDFPELRETLDHFKTA
FNHEEAKKEGFIVPKHGVDREYDAVLMELADIKKELDSYLEKQRKHFGVQIKFCGNDKKR
FQIEVPESQIKKVGSGYELQGSRKGFKRYYTEESKDLLARQIAAEEQKDKVLKDSNRKIF
AKFSDQYDKWSNATYNIAVLDCLISLAEYARTCVTCIPTIFDDTDDQGIFIEIREGKHPC
IVSENFIPNDTVIATAEAAPLIILTGPNMGGKSTLMRQVGLITIMAQIGCHVPATDCNLT
LVDRIFTRLGANDDIMAGQSTFLVELSETSAILQHATKYSLVLLDELGRGTSTYDGTAIA
ASVVEALTKIQCRTLFSTHYHTLVEDYKMNKNVTLAHMACMVESDDEDQISEENVTFLYK
LSEGACPKSYGFNAARLAGVPASITKRAQSIATKLEAEVNLRHAFTALCKITDSTAVKPL
FQKGFEFLSKC

NT seq 3456 nt +upstreamnt +downstreamnt
atgccgaaggtgaatacgctgttcaactatttcacctcgccgaagggagcctcaccgaga
tcgaacaactcctcaccggcgccgaagcccagggcgtccaaggcgaaatccgagactccg
aagagggaacaaaagaacaaagatactaagagaggcaaaggcaaagacaaggagaacgtt
cgagagaatcaagagagaaaaaggtctttggatgatctcgatgacgatgaggaaccaaag
gagagcgaggaagctgttacaccgaagcctactcccaagagaaggagaatcatcattcca
gaagataatagtgaggattccggtgatgaatacaagcctgatgagtccgctgaatctgaa
gaggatttggatctttcagtggtcagcgaaagtgaacccaatactgcttcggaagatgag
gatgaaacaccaaagaaaaaacagaaaatgtccaatattaagacaccatccagaagaggt
ggtggtgctaaaaagtcaatcgctaaaaaagattcaggaactggtcaagagcaacccact
ggaaaagcatcagacacacaggattggccccatttaaagtatgaatttttgcagaaagat
aagatcagagataacaaaaaacgtcgatccactgaccctgattatgatccaagaactgtc
tatgtgcctccagactttttggataagcaaacacctgccatgcgtcagtggtgggttttg
aaatctgatcattatgactgcgtattattcttcaaagtgggcaaattttatgaattgtac
cacatggatgctgtgactggagtcaatgagctcagtttaacattcatgagaggagaattc
gcgcattctggctttccagaaattgcttatggacgattttctgcaagtctaattgaaaga
ggttacaaggttgcaagaattgaacaaacagaaaatccagaaatgatgagtcaacgatgc
gctaaaatgggcaaaacgactaaatttgacaaagtcgttaaaagagagatttgtcagatc
agtaccaagggaacaagagtctatactgcccaagatgctgaagcttcagccccaacgtct
acgtacttgctgtctatcattgaaaaacaggagcgtaatcaaaatatatcaagttatgga
gtctgtttcattgatacaaccattggagatttcaatcttggtcagtttcaagatgatcgc
tgcaactcgagactattaacgctacttgctcattatcctcccgctcacgttatttatgag
cgtaataatttaagtcaaaccactttaaagattttgaacaacttattacctggtgcaatg
aaagaagccttacagaaagaagttcaattttggtcatccaccaaagttttgaatgttcta
cacgaggctgattactttaaaaacgaagaagattccagtttttcatggccaaaaggttta
gaaccatatttaaatgatggagacagcttaggacttacgcctttggaagaaaagcaatta
gcagttaatgctcttggtggatgtgtgtatttactcaaaaactatcaattggatcatcag
ttattagcgcaaggaaggttcaaaacttacgtaccacccgacttttccgttaatgctgag
aagtcagacggaaccaagttggcttataatatggttttggatgccatgacaataactaat
ttgagagttcttggtaatgaaggatcgttgataaagacattagataattgctgcactgct
ttcggtaaaagattattacgagaatgggtatgcaggccatcttgccgcaaaagcgttatt
gtcgaacgacaaaacgctataactgaattgatagataacccggacgtagttcaggaagtt
cgtagcaagttgagcggattaccggatctcgaaagattgttgagcaaaattcacgtacaa
ggaaatgctgcaaaactacgtaatcatccagatggacgtgctatcatgtttgaaggtccc
gcctactccaagaaaacaatcgttgactttattacagcacttaatggctttgaagatatt
ttaaaattaattaaaaaattttcgaaattcactaatccactcatcaacaagtgtacgcaa
ttggaaccagaaggcgatttcccagagttgcgagaaactttagatcacttcaaaacggcg
ttcaatcacgaagaagccaaaaaggaaggattcatagtacccaaacacggcgtcgacaga
gaatatgacgctgttttgatggaactggctgatattaaaaaagaattagattcttacctt
gagaagcagagaaagcatttcggagtccaaataaagttttgtggaaacgacaaaaagaga
ttccaaatagaagtcccagaaagtcaaattaaaaaagtcggcagcggctacgagttgcag
gggtcaagaaaaggtttcaagaggtattacactgaagaatccaaggatcttcttgcaaga
caaatagctgctgaggagcaaaaggataaagttttgaaagacagtaataggaaaatcttt
gccaaattcagcgaccaatatgacaaatggagcaatgccacctacaatatcgcagttctg
gattgtttgatatctcttgcggaatatgcccgtacatgcgtgacgtgcattcccacaatt
tttgatgatacggatgatcaaggcatattcatcgaaatacgggagggcaaacatccatgc
attgtttccgaaaactttattccgaatgacactgttattgcgaccgccgaagccgctcca
ctcataattttgactgggccgaatatgggaggtaaatcaacactgatgcggcaagttggt
ctcattacaataatggctcaaatcgggtgtcatgtaccagccactgattgcaatttaacc
cttgtcgatcgcatcttcactaggttgggagcgaatgacgatattatggcaggccagagt
acgttcctggtcgagttgagcgagacttctgctatattgcaacacgctacaaagtactct
ttagttttgctggatgaactaggtcgcggtacatcgacttacgatggaactgctattgcc
gcgtctgtggtggaagcccttaccaaaatacagtgcaggacacttttctccactcattat
catactcttgtggaagattacaagatgaataaaaatgttaccctcgcgcatatggcatgc
atggttgaaagtgatgatgaagatcaaataagcgaagagaacgtaacgttcctttacaaa
ttgagcgaaggcgcgtgcccgaaatcttatggtttcaatgctgctagattagctggagta
cctgcaagtatcactaagcgcgctcaaagtattgcgaccaaattagaggctgaagttaat
cttcgacatgcatttactgctctttgtaaaattaccgatagtactgccgtcaaaccgttg
tttcaaaaaggctttgagtttctttcaaagtgttag

All links

Gene (71)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   NASONIABASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (84)   

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