KEGG   Nasonia vitripennis (jewel wasp): 100115700
Entry
100115700         CDS       T01081                                 
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
nvi  Nasonia vitripennis (jewel wasp)
Pathway
nvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100115700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nvi03041]
    100115700
Enzymes [BR:nvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100115700
Spliceosome [BR:nvi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    100115700
 Complex C
   U5 SnRNP specific factors
    100115700
SSDB
Motif
Pfam: Sec63 SNRNP200_wHTH DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_30 AAA_22 nSTAND3 HTH_61 AAA_16 DEXQc_Suv3 DnaB_C
Other DBs
NCBI-GeneID: 100115700
NCBI-ProteinID: XP_001599298
NASONIABASE: NV18250
UniProt: A0A7M7G4R7
Position
1:22310639..22319042
AA seq 2129 aa
MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVMSLVGKLDGTRMGDRAQRSK
PGKAEERKVKRQKRDEAQYEFTHNKGATVLSDGVDEMVGIVYRPKTQETRQTYEVLLSFI
QEAIDHQPRDILCGTADEVLAVLKNDKLKEKEKKKETELLLGSLADERFALLVNLGKKIT
DFGTDEKTTTGEENIDETYGINVQFEESSEEDDEDVYGEVRENEDEGDEGVEANEDRAIH
AENLGKAEETKKEKPLHPRDIDAYWLQRQLKAIYNDAIVSHGKAKDVLEVLKTSVDCENQ
LVLLLGYDCFDFIKMLKKYRHMIAYCTMLASSQSNSERQKIRKKMSEDPALSKILYQLET
GKGDEGEETIEAREQRHRREEIEDAGGPGGLVPGTRNVIDLEDIAFAQGSHFMPNKRCHL
PDGSFRKQRKGYEEVHVPALKPKPFAENEKLVSINDLPKFAQPAFEGFKTLNRIQSRLYK
CALDEDENLLLCAPTGAGKTNVALLCMMREIGKHINADGTINADDFKIIYIAPMRSLVQE
MVGNFGKRLASYNLTVSELTGDHQLTREQISSTQIIVCTPEKWDVITRKGGEKTFTSLVR
LIIVDEIHLLHDERGPVLESLVARTLRNIETTQEDVRLVGLSATLPNYEDVAAFLRVKPA
TGLYYFDNSFRPVSLEQQYIGVTEKKALKRFQVMNEVVYEKTMEHAGKNQVLIFVHSRKE
TGKTARAIRDMCLEKDSLGQFLREGSASMEVLRTEAEQVKNMELKDLLPYGFAIHHAGMT
RVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELGALDVL
QMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVSKMPDMMNAEIVLGTI
QNVRDAVTWLGYTYLYIRMLRCPTLYGISHDKIRDDPLLELHRADLVHSAAMALDRSGLI
KYDRKSGNFQATELGRIASHYYCTHETISTYNQLLKRTLSEIELFRVFSLSSEFKNINVR
DEEKLELHKLMERVPIPIKENMEEPSAKVNVLLQAYISQLKLEGFALMSDMVYVTQSASR
LMRAIFEIVLFRGWAQLADKCLSLCKMIDRRMWQSMSPLRQFRKMPEEIVKKIEKKNFPW
ERLYDLGPNEIGELIRVPKLGKTVHKYIHQFPKLDLSTHIQPITRSTLRVELTITPDFMW
DDKVHGASEAFWILVEDVDSEVILHHEFFLLKSKYAGDEHLIKFFVPIFEPLPPHYFLRV
VSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPITALRNSVFENLYVEKFPQFNP
IQTQVFNAVYNSDDNVFVGAPSGSGKTTIAEFAVLRLISQNPDGRCVYMVSKEALAEIIY
SDWAYKFKSLGKKVVLLTGETGTDLKLLAKAQIIITTADKWDVLSRRWKQRKNVQNIQLF
IIDELQLIGGEEGPVLEVACSRARYISSQLDKPTRIVALSASLADAKDVAQWLGAPAAAT
FNFQTSVRPIPLELHVQGINITHNASRLAAMAKPVYNAILRHALRKPAIIFVPTRKQARL
TAFEILTFTAAEGKPTQFFHAEESDIKPFLDRMSDKTLKETLAQGVAYLHEGLSANDRRL
VEQLFDSGAIQIAVCTRDLCWSLSIYAYLVVVMDTQCYNGKTHAYEDYPVTDVLQMVSRA
NRPQEDDDSKCVLLCQSSKKDFFKKFLMEPLPVESHLDHRLHDHFNAEVVTKTIENKQDA
VDYLTWTLLYRRLTQNPNYYGLQGVTHRHLSDHLSELVESTLSDLEQAKCVTVEDEMDVT
PLNLGMIAAYYYINYATVEMFDASLNAKTKIRGLIEIISAAAEYEAIPVRQKEENLLRSL
ASRLPHAPQAQRMADPHIKAQLLLQAHLSRIQLGPELQHDTELVLNKSIRLIQASVDVLS
SAGWLAPAVAAMELAQMVTQAMWSKDSYLKQLPHFTPEIIKRCTDKGVETVFDVMELEDD
VRNRLLQLTEQQMTDVAKFCNRYPNIEMAFDVQDKDRIRLGDTVNVVVQLEREDEVTGPV
VAPLFPQKREEGWWVVIGDPKANQLLSIKRLTLQQKATVKLDFLAPAPGQHHYTLYFMSD
AYLGCDQEYKFSINVGEYMSDASSGSESD
NT seq 6390 nt   +upstreamnt  +downstreamnt
atggcggacgcagcggctaggcagctgcaatacgaatacaaagcgaattctaatcttgta
ttacaagctgatgtgagactcatcgagagacgaagcagagatgaagctacaggagaagtt
atgtccctggtgggcaagctcgatggcacgcgaatgggcgatcgtgctcaacgatcaaaa
cccggaaaggccgaagagagaaaagtcaagcgacaaaaacgtgatgaagcacagtatgag
tttactcataacaagggtgccaccgtcctctccgatggtgtggatgagatggttggcatc
gtatacagacctaaaacacaagagactcggcagacgtatgaagtcttgttaagtttcata
caagaggctattgaccatcaacctcgcgatatactttgtggtactgcagatgaagtatta
gctgttttaaagaatgacaaattaaaagagaaggagaagaaaaaggaaactgaactttta
cttggaagtttagccgatgaacgatttgctctattggtcaatttagggaaaaaaataacg
gattttggtacagatgagaaaacaactacaggcgaggaaaatattgatgagacatatggc
attaatgtccaattcgaggagagcagtgaggaggatgatgaagatgtgtatggagaagtt
agagaaaatgaagatgaaggggacgaaggagtcgaagctaatgaagatagagccattcat
gctgaaaatttaggcaaagcagaagaaacgaaaaaggaaaaacccttacatccaagagac
atcgatgcttattggcttcagagacagttgaaagctatctataatgatgcaattgtctcc
catggaaaagctaaagatgtacttgaggttttaaagacctcagtcgactgtgaaaaccaa
ttagttttattactaggctacgactgctttgacttcatcaagatgcttaaaaaatacaga
catatgattgcatactgtacaatgttggcatcttctcagtcgaacagtgaacgtcaaaaa
attcgcaagaaaatgtctgaagatccagcactttcaaaaatcctttaccaattggaaact
ggtaaaggtgatgaaggtgaggagaccattgaggcaagagagcagcgtcataggcgcgaa
gaaatcgaagatgctggtggtcctggaggattagttccaggaacacgaaacgtaattgac
ttagaggacattgcctttgcgcaaggaagtcacttcatgcctaataaacgttgtcactta
cctgatggaagttttagaaaacaacgtaaaggatacgaagaagtgcatgtaccagcattg
aaaccaaaaccgtttgctgaaaatgaaaaacttgtttccataaacgacttgccgaaattt
gcccagcctgcattcgagggtttcaagacccttaacagaattcaaagtcgtttgtacaag
tgcgctttggacgaagatgaaaatttattattatgtgctccaacaggtgccggtaaaact
aatgtcgctttgttatgtatgatgcgtgagataggcaagcacataaatgctgacggcact
ataaacgccgacgactttaaaattatatacattgcaccaatgcgttctctcgtacaggaa
atggttggtaattttggcaaaagattagcctcatacaacctgacagtgtcagagttaaca
ggcgatcatcaattaaccagagaacaaatctcctctacacagattatagtatgtaccccg
gaaaaatgggatgtcattacgagaaaaggaggagaaaagacctttacctcactcgtaaga
cttatcattgttgatgaaattcatttgcttcacgacgaacgtggtcccgttcttgaatcg
ttggtagcaagaactttaagaaacattgagacgactcaagaagatgtcagactagtaggt
ctgtcagctacacttccgaattacgaagatgtcgccgcattcttacgcgtcaaaccagcg
actggactttattatttcgacaatagttttaggcctgtgtcattagagcagcaatacatc
ggtgttacggaaaagaaggctctaaaacgttttcaggttatgaatgaagtcgtctatgaa
aagacaatggagcatgcgggtaaaaatcaagtgcttatattcgtgcattcgaggaaggaa
accggtaaaaccgctcgtgcaatcagggatatgtgcctggagaaagatagtcttggacag
tttctcagagaaggctcggcatccatggaagttttgagaactgaagccgaacaagttaag
aacatggagttaaaagatctgttgccttatggtttcgcaatccatcacgccggaatgaca
agagtcgatcgtaccttggtagaggatctctttgccgataggcatatccaagttctggta
tctactgcaactcttgcatggggtgtaaatttgccagcgcacactgtcattattaaaggt
acccaagtttataatccagaaaaaggacgttgggtggaattaggagctctggatgtgttg
caaatgctgggtcgtgctggacgtccgcaatatgacaccaaaggagaaggtatactcatt
acgaaccacagtgaactccagtattacctgtcccttttgaatcagcaactccccatcgaa
tctcagctagtcagcaagatgcccgatatgatgaatgcagaaatagtacttggtacaatt
cagaatgttcgcgatgcagtaacgtggctcggttacacatacctctacatcagaatgctt
cgttgtcctactctttacggtatcagccacgacaaaatacgcgatgatcctttgctagag
ttgcaccgtgcagatttagtgcactctgctgccatggctctggaccgcagcggtcttatc
aaatacgatcgcaaatctggtaacttccaagctaccgagcttggtagaattgcttctcat
tactactgtactcatgagactatatctacctacaatcaactattgaagaggacactcagt
gagatcgaactattccgtgtattctcgttgtcaagcgagttcaaaaatattaatgttaga
gatgaagagaaattagaattgcacaaactaatggaacgcgttccgattccaattaaggag
aatatggaggagcctagcgcgaaggtgaatgtactgcttcaagcttacatatctcaacta
aaacttgaaggttttgccctcatgtctgacatggtttatgtcactcaatctgcttcccgt
ttgatgcgcgcaattttcgagattgtattgttccggggctgggctcaattggcagacaaa
tgcctctcgctttgtaaaatgattgatcgtcgtatgtggcaatctatgtcgccgctgcga
cagtttcgcaaaatgcccgaagaaatagtcaagaagattgaaaagaaaaactttccatgg
gagaggttgtacgatcttggaccgaatgaaattggtgaacttatacgtgtgcccaaactt
ggaaagactgtccataaatacattcaccaatttccgaaactggatctttccacacacatt
cagccgattacgagatcaacattgcgcgttgaattaacgattacacctgacttcatgtgg
gacgacaaagttcatggtgcatcggaagccttttggattcttgtggaagatgtcgattct
gaagtgattttgcatcacgaattcttcttgctcaagtctaaatatgccggagacgaacac
ttgataaaattttttgttcccattttcgaaccattacccccgcactacttcttgcgggta
gtatccgatcgatggatcggcgctgaaacacaattgccggtaagtttccggcatttgata
ctcccggagaagaatcttcctccaacagaattattggatttacaaccattgccaatcacg
gctttgagaaactccgttttcgagaatttgtacgtggagaagtttccgcagtttaaccct
atccagactcaggtcttcaacgccgtgtataattccgatgataacgtgttcgttggtgca
ccaagtggctccggaaaaactacaatcgccgaattcgccgttctgcgattgatctctcaa
aatccggatggaagatgcgtttatatggtgtcaaaagaagcgcttgctgaaattatatac
agcgactgggcgtataaatttaaaagtcttgggaaaaaagtcgtgcttttgactggcgag
actggtacagatctgaagcttttggccaaagcacagatcatcattacaaccgccgataaa
tgggacgtcctttcacgaagatggaagcagagaaagaatgtacaaaacattcaattgttc
atcatagatgaactacaactcataggcggcgaggagggaccagttttagaagtagcttgc
tccagagctaggtacatttcgtctcaattggataagccaaccaggattgttgccttatcg
gcatcactggccgatgccaaagatgttgcgcagtggctgggtgctcctgcagctgctact
ttcaatttccaaacatctgtgcgccctatacctcttgaacttcacgttcagggtatcaat
attactcacaacgcatcgcgtttagctgccatggcaaaaccagtgtacaatgcgatcttg
cggcatgcactgagaaagcccgccatcatctttgtaccaacacgaaaacaggcaagattg
acggcatttgagatcttgacctttacagcagcagaaggaaagccgacgcaatttttccac
gccgaagaatcggacatcaaaccatttttagacagaatgtctgataagaccttgaaagaa
actttggctcaaggagtcgcttatttgcacgaaggtttgtcagcaaacgatagaagactt
gtagaacagttattcgatagtggggcaatacaaatcgctgtttgcactcgggatctctgt
tggagtctctcaatctatgcttaccttgtggtagtcatggacacccaatgttacaatggt
aaaacgcacgcctacgaggactatcccgtgacggatgtcttgcaaatggtgtcacgagca
aacagaccacaagaagatgacgattctaaatgcgtactcctttgccagagctcaaagaaa
gactttttcaaaaagtttttgatggaaccgttgccggtggaaagtcatttagatcatcgt
ttacatgaccattttaatgccgaagtggtcacaaagaccattgaaaataaacaggatgcc
gtagattatcttacgtggactctactctacagacgactcacccaaaatccaaattactat
ggactgcagggtgtcactcacaggcatttatctgaccatctttcagaacttgtcgagagc
actctgagtgacttggaacaagccaaatgcgtaactgtagaagatgaaatggacgtcacg
ccattgaatctcggaatgattgcagcatactattacatcaattacgcaaccgttgaaatg
ttcgacgcgtcccttaatgcgaaaactaagattagaggattaatagaaatcatatcagct
gcggctgagtatgaggcgataccagttcgccaaaaggaagaaaatctcctgagaagctta
gcaagcagattgccgcatgctccacaagcacaaagaatggctgatccccacatcaaagct
cagcttttattacaagcacatttatccagaatacagctaggacctgagctacaacacgat
acggagttagtgctgaataaatcgatcaggctgatacaggcctctgtcgatgtcctgagt
tctgcaggttggcttgcacctgcggtagctgctatggaattggctcaaatggtcacacag
gcgatgtggtcaaaggattcatatctcaaacaattgcctcatttcacgcccgaaataata
aaacgttgcacagacaaaggtgtagaaaccgttttcgacgtcatggagctggaggatgat
gtacgcaaccggcttttgcaactaactgagcagcaaatgacggatgttgctaaattttgt
aatcgttatcctaacatcgagatggcattcgatgttcaggacaaagatagaatccgactt
ggagataccgttaatgtcgttgttcaattagaacgcgaggatgaggttacagggcctgtg
gtagcacctcttttcccacagaaaagagaagaaggatggtgggtggttattggtgacccc
aaggccaatcagctcttgtcgatcaagaggttaacattacaacagaaagctaccgtgaaa
cttgactttttggcaccagctcctgggcaacatcactatacgctttacttcatgagtgat
gcatatttgggatgtgatcaagaatataaattctctatcaacgttggagagtatatgtcg
gatgccagctctggatccgagtcggactaa

  All links  
Gene (73)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   NASONIABASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (90)   

Download RDF
DBGET integrated database retrieval system