KEGG   Osmia bicornis bicornis (red mason bee): 114871219
Entry
114871219         CDS       T06109                                 
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
obb  Osmia bicornis bicornis (red mason bee)
Pathway
obb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114871219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obb03041]
    114871219
   03009 Ribosome biogenesis [BR:obb03009]
    114871219
Enzymes [BR:obb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     114871219
Spliceosome [BR:obb03041]
 Complex A
  U1 snRNP components
   U1 related factors
    114871219
 Complex B
    114871219
Ribosome biogenesis [BR:obb03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    114871219
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C MEIOC
Other DBs
NCBI-GeneID: 114871219
NCBI-ProteinID: XP_029032685
Position
Unknown
AA seq 609 aa
MFSRDREHNRGRRGGISRGSIRGGVENIRGNSISRFGGRGRGTTNNIRGSIKGKQPGGTL
RKIIWDVRSLEPLRKDFYIEHPSVRNRSKEEVGQFRENAEITVKGDNIPNPIQYFEEGNF
PPYVLEVIHKQGYSQPTAIQAQGWPIALSGKDLVAIAQTGSGKTLGYILPAIVHIIHQPR
LSPGDGPVALILAPTRELAQQIQEVANCFGESSGVRNTCIFGGAPKGPQAHDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT
WPKEVRALAEDFLTDYMHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKE
NKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVA
ARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGDLIEVLR
EAGQNINPRLTEMAELAKSGNPGNRSGKRFMGTDRSNGRRGSNDNRGRGVSTRGRGLAGG
RSGNTYQSTSNGYSGSDYSSYNNSKQGNTIHQNSGYGYNTQRSYGQSSLAQSYGGDSYGN
TYQYRGTTY
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgttttctcgtgatagagaacataatagaggccgtagaggtggtatttccagaggtagc
attagaggaggtgttgaaaatattcgtggaaacagtattagtagatttggtggacgtggt
agagggactacaaataatattcgtggtagtataaaaggcaaacaacctggagggactctt
agaaaaatcatttgggatgtacggtcattagaacctttacgtaaagatttttatattgaa
catccttcagttagaaacagatcaaaagaagaagtgggccaatttcgagaaaatgctgag
ataactgtgaaaggtgacaatatacctaatcctatccaatattttgaagaaggaaatttt
ccaccttatgtgttagaagttatacataaacaaggatactctcaacctacagcaattcaa
gcacaaggatggcctattgcactcagtggcaaagatctagttgctattgctcaaactgga
tctggaaaaacacttggatatattctaccagcaattgtacatatcatacaccagccaaga
cttagtcctggtgatggtccagttgctctaatcttagctcctaccagagaactagctcaa
cagattcaagaagtagctaactgttttggagaatcatcaggtgttagaaacacttgtatt
tttggtggtgcacccaaaggtccacaggcacatgatctagaaagaggtgttgagatatgt
attgctacaccaggtagacttattgatttcttagaaagaggaactacaaatttacgcagg
tgcacatatttagtactagatgaagctgatagaatgttagatatgggttttgaacctcaa
ataagaaaaataattgaacaaatccgacctgatagacaagttttaatgtggtcagctaca
tggccgaaagaagttcgagctttagcagaggacttcctaactgactatatgcatcttaat
attggttctttgactctgtcagctaatcataacattattcagatcgtggacgtttgccaa
gaattcgaaaaggatttaaaattatatagattacttcaggaaattggaaacgaaaaagag
aacaaaacgatcattttcgttgaaacgaaacgtaaagttgatgatattacgagaaatata
aggcgagatggatggcaagcattgagtattcatggtgataaaaatcaacaagaaagagat
cacgtactacaagaatttaaaagcggaagggctcctattctagttgcaacagatgttgct
gctagaggtttagatgtggacgatgtcaagtatgtaataaactttgattatccatcatca
tcagaggattacatacatagaatcggtcgtaccggacgaagaaggcagaccggaactgct
tatgcatttttcacaacccataatatgaaacatgctggagacctaatagaagtattaaga
gaagcaggacaaaatataaatcctcgacttactgaaatggcggaattggctaaatctggg
aatcctggaaatagaagtggaaaacggtttatgggtactgatagaagtaatggtagacgc
ggtagtaatgataataggggaagaggcgtttctacaagaggaagaggtcttgccggtggt
cgtagtggaaatacttatcaatctacttcaaatggctattcaggttcagattacagtagt
tataataattcaaaacaaggcaacacaattcatcagaactcaggatatggttacaataca
caaagatcatatggacaaagtagcttggctcaaagttatggaggagatagttatggaaat
acctatcaatacagaggtacaacgtattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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