KEGG   Octopus bimaculoides (California two-spot octopus): 106882766
Entry
106882766         CDS       T04127                                 
Name
(RefSeq) recQ-like DNA helicase BLM
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03440  Homologous recombination
obi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106882766
   03460 Fanconi anemia pathway
    106882766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obi03032]
    106882766
   03400 DNA repair and recombination proteins [BR:obi03400]
    106882766
Enzymes [BR:obi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     106882766
DNA replication proteins [BR:obi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    106882766
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     106882766
    Bloom's syndrome complex (BTR)
     106882766
   FA (Fanconi anemia) pathway
     106882766
SSDB
Motif
Pfam: DEAD RQC Helicase_C RecQ_Zn_bind HRDC ResIII
Other DBs
NCBI-GeneID: 106882766
NCBI-ProteinID: XP_014789034
EnsemblRapid: LOC106882766
UniProt: A0A0L8FKH1
Position
27:complement(3482380..3488501)
AA seq 1464 aa
MDENNSKYVHKSGFKFKRTSSLQKPSSSISCLLNLPSRDPSTNTSSSYSRGTDITTTNST
PNNVVSNQLSNCSDRFDTSNVCDKIQTPLSASTATNTSVRSASSIINLLPKLNRSSTAPA
MTNADKSMAIKQPLSLESKPSCVNSSTVTSAAHVGSSSLSKEPKPVQKTMSSFLSNLPLA
NLKPIQAVSPRPIISPQSAQPTSSTKRKLGSDEQSKNNAKPKSNSLVLPDHHCDKNEDDD
DFDDSFAVSPVINRKKAPLHVPSLPPNTTSKPSSITSSPARPNSSKFSASKKPETPKTKY
STSVIMVPDSDVDDDTEIVCKPKKRRKNRVVSSDDDEVDGGGDKRNEGDPKISSFDSPVK
TPLASRMKKTPRSPVASESTASSSQSSNLKQQLDDVTANPLLQKESLTKEDINNLRILLF
MTMDEVCDIISKIPSADLINVAFKDYKRLQHLLLTRKLLKDKTKPAKTLSPKKNKNEPDV
NKTTPSNKTSLVKRLLTSKVSSPLSVPSKAKVINSHIPCGDSFFDENPSHSTPVPNSLDR
NMKNSTSMSPSVSKFNESHDVVNNNNNNEISINDDSFSHEDGFSDVDADDLIASVDEESN
FQFGYKLSDSSSKSKPDNHSVSAVQNSFQRRSSSDNFSLPETSNFDNDRITSSGMLSPVR
NRENQKLSDILKKSPPPSPVFKSALSQSEPMKSASDDEEIYGKSSEFDGFHFPHSDDMLT
MFRQVFGLKKFRGSQLQAINASLLNHDCFILMPTGGGKSLCYQLPALISNGVSIVISPLR
ALIMDQVERLLSLDIPAASLSGDVSLKDSDSVYMQLSMKEPPLKLVYVTPEKISSSTKLM
TLFENLNARGLLSRFVVDEAHCVSQWGHDFRPDYKRLYMLRDKFPHVPMMALTATATLRV
RKDIIHQLHMKSPKWFVKSFNRPNLKFSLAEKKPKSTTDEIAELIKSKFRNQSGIVYCLS
RKECDEVAKNLSKRGIKAIAYHAGLLDSQRAQTQEGWLNDIWKVICATIAFGMGIDKPDV
RFVIHFSMPKSVEGYYQESGRAGRDGLLASCTLFYNYQDVKRLRRMIDLDRNCTYESKKV
HIDNLYQMVRYCENKADCRRGQLLQYFGEYNFNTEICNEFPGAICDNCSSKTTFHVRDVT
DDVKEIIRFVKDMCHDRKLNCTLIYLTDVFRGSRNKGVLNLGHDEHSLHGRGQSYLSQDA
TRLLRKLVIDTILREELTVTAMDHTVCYVKLGARAKEVMMNKLKINLPVHSGKKTVVTDV
DTEVVTDKKKLLDDCYQELLELAKQIAQERHIHNYASVFPNPMLLSMATEVPLTIDEMQE
KIDGLTMQKIAKYNAERFLEITNKYCMLYSNLNTHSSSVQSVDFSDEWESPYFAWNSSNT
FSANSIKRKQPVRRKGTYKRKKGRKTTKRSSPLKRSTAFKAASTTAKNSLKKFQYSQMNK
SSKSASSSKLGYMPVPKLKSSFLS
NT seq 4395 nt   +upstreamnt  +downstreamnt
atggacgaaaataattccaaatacgttcataaaagtggtttcaagttcaaacggacttcg
agtttacagaaaccgtcgtcttctatctcgtgtctgctaaatcttccttctcgcgaccca
tcgaccaatactagtagtagctacagcagaggtacagacattactaccaccaattctacg
ccaaataacgttgtaagtaaccaactttccaattgttcggatagatttgatactagcaat
gtttgtgataaaatccaaactccattgtcagcttccaccgcgacaaacacgtcggttcgt
tcagcttcttcgattattaatttactaccaaaactcaatcgctcgtcaacagcaccagcg
atgacaaatgcagacaaatcgatggcgattaagcagcctttgtcgttggagagcaaacca
tcttgcgtcaattcgtccaccgtcacttctgctgctcatgtcggttcgtcgtccttgtca
aaagaaccgaagcccgttcaaaaaacaatgagcagtttcttgtctaatttgccgctggcc
aatctgaaaccgattcaggctgttagccctcgaccaatcatttcgccacagagtgcgcaa
ccgacttcatcaaccaaacgaaagctgggtagcgacgagcaaagcaaaaacaatgcgaaa
ccaaaatcgaacagcctggttcttcctgaccatcactgtgataaaaatgaggatgatgat
gatttcgacgatagctttgcagtttcgcctgttatcaatagaaagaaggcaccccttcat
gtaccctcgcttccaccaaacactacttcaaaaccgtcttccatcacttcatctcctgca
agacctaactcttctaaattctccgcttcaaagaaaccagagaccccaaagacaaaatac
agcaccagcgtcatcatggttccagatagtgatgtcgacgatgatactgaaatcgtgtgc
aagcctaagaagcggcgaaagaaccgtgttgtatcgagtgatgatgatgaagttgatggt
ggcggtgataaacgaaatgaaggagacccaaaaatatccagttttgattcacctgtgaaa
actccattggcctctcgaatgaagaaaacccctcgttcccctgttgctagcgaatcaact
gcttcctcttcacagtcatcgaatcttaaacaacaacttgatgacgtcacagcaaaccca
ctgctgcaaaaggaatcattgaccaaagaagacatcaacaatctcagaatcctgttgttc
atgacgatggatgaagtttgtgatattatcagtaaaatcccttcagctgatcttatcaat
gttgcgttcaaagattacaagcgtttgcagcatctgcttctcacgcggaaactactcaaa
gacaagactaagccagccaaaacactatctccaaagaaaaataagaatgagccagatgtt
aacaagactacaccatcaaataaaacatcccttgtgaaacgtctcttgacttccaaggta
agctcaccattgtctgtgccttcgaaagcaaaagtaatcaattctcatattccgtgcggg
gacagtttctttgatgaaaatcccagccattccactcctgtgccaaattcacttgataga
aacatgaaaaactctacttcaatgtctccttctgtgtcgaaatttaatgagtctcatgat
gttgtcaataataataacaacaacgaaatcagcattaatgatgactcttttagtcatgaa
gacggtttctcggatgttgatgctgatgatcttatagcatctgttgatgaagagtcgaat
ttccagtttggttacaaactctcagacagcagctccaaaagtaaacctgacaaccattcc
gtttcagctgttcaaaactcgtttcagagaaggtcaagttccgataatttttctttacca
gaaacatcaaactttgataacgacagaatcactagttcgggaatgctatctccagttcgc
aatagggagaaccaaaaactcagtgatattcttaaaaagagtccccctccaagccctgtt
tttaaatcggccctctcccaaagtgaacccatgaaatctgcatctgacgatgaggaaatt
tacggcaaatcatcagaattcgatggtttccatttcccacacagtgacgacatgttgacg
atgtttcgacaagtgtttggcttgaagaaattccgaggttctcagttgcaagccatcaat
gcatccttacttaatcacgattgtttcattttaatgccaacaggtggcggtaagagtctc
tgttaccagctgccagcactgattagtaacggagttagcattgtgatatcgcctttgcga
gccctgataatggatcaagttgagcggcttttatcgttagacattccagctgcatcatta
tctggtgatgtaagcttgaaagactctgattctgtatatatgcagctatccatgaaagaa
ccacctctaaaacttgtatatgtcacaccagagaaaatctccagcagcaccaagttaatg
acgttgtttgaaaaccttaacgctcgtggcttactcagtcgattcgttgtcgacgaagca
cattgcgtcagccagtgggggcatgattttcgacctgattacaaacgcttgtatatgctc
agagacaaatttccgcatgtccccatgatggctctgacagccacagccactcttcgcgtc
cgaaaagatattatacaccaactccacatgaagtctccaaagtggtttgtgaaaagcttc
aaccgacccaatttgaagtttagccttgcagagaagaaacccaaatccacaactgatgaa
attgctgaattaattaaatccaagtttagaaaccagagtggcatcgtgtactgcttgtct
cgcaaagagtgtgatgaagtagcgaagaatttgagcaagagaggaataaaagccattgct
taccatgctggtcttttggacagccagagggctcagactcaggaaggttggttgaatgat
atttggaaagtcatttgtgcaaccattgcatttggaatgggtatagacaagcctgatgtg
cgttttgtcattcatttctcaatgccaaagtctgtcgaaggatattatcaagaatctggc
cgagcagggcgtgatggccttttggcgtcttgcacgctcttctacaattatcaggatgtg
aaacgattgcgtcggatgatcgacctggacaggaactgtacatacgaatccaagaaagtt
cacatagacaacctctaccaaatggtgcgctattgtgagaacaaggcagactgtcggaga
ggtcagttgctgcagtatttcggtgaatataatttcaacactgagatatgtaatgaattt
cctggagctatttgtgataactgttcatcgaaaactactttccatgttcgtgatgtcact
gacgacgtgaaagagatcatacgctttgtcaaggacatgtgccatgaccgtaaattaaat
tgtactcttatttacctgacagatgtgtttcgaggttctcgtaataagggtgtcttaaat
ctgggccatgatgagcattccttacatggaagaggccaaagctacttgtcacaagatgcc
accaggttactacgtaaactagttattgacacaatcctcagagaagaactgacagtcaca
gcaatggaccacactgtgtgttacgtcaaacttggagcacgggctaaagaggtgatgatg
aacaaattgaaaataaacctacctgtgcatagtggcaagaagactgtcgtcaccgatgtc
gacaccgaggttgtaacagacaagaagaaacttttggatgattgctaccaagagttgctg
gaattagccaaacaaattgctcaagagagacacatccacaactacgcatctgtgtttccc
aatccgatgctactctccatggctaccgaagtcccgctaactattgatgagatgcaggag
aagatcgacggcctcactatgcagaagattgccaagtacaatgctgaacgcttccttgag
attaccaacaagtactgcatgctttattccaatctcaacacccacagttcctcagtgcag
tcggtggatttcagcgacgagtgggagtccccgtatttcgcttggaattcttcaaatact
ttctcagccaacagcatcaaaaggaaacaaccagttcgtcgaaagggcacctacaagaga
aagaaggggagaaaaactacaaagagatcttcacctttaaaacgaagcacagcattcaag
gctgcttccactacagcgaagaattctttaaagaaatttcaatattcacaaatgaacaaa
agttcgaaatcagcaagctcgagtaagcttggttatatgccagtaccaaaattgaagagc
tcgttcctctcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (89)   

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